| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1717 |
|---|
| Symbol | |
|---|
| ID | 6287747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1810752 |
|---|
| End bp | 1812149 |
|---|
| Gene Length | 1398 bp |
|---|
| Protein Length | 465 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 642625281 |
|---|
| Product | heavy metal sensor signal transduction histidine kinase |
|---|
| Protein accession | YP_001899287 |
|---|
| Protein GI | 187928800 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | [TIGR01386] heavy metal sensor kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.509729 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 33 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGGCAGT TCTCCCTGAC CACTCGGCTC ACCGCGTATT TCTCGCTGTG TTCGGCAGCC
GTCTTGCTGG GCCTGGGCGT GGTGATTGCG CTGGCCATGG ATCAGCACTT TGCGGTGGAG
GACTACACCG CGCTGCGCGA GAACGTCAGC GTCATTGAAA AGATTGTCGA ATCGAGTCCC
GCCGAACAGG TCCCCGAACG CATCCGCGAG GCAATCCAAC ATCGCACCGA TCTCGTAGCT
CGTATCCAGG GTTCGGACGG GCACATGCTG TACGTAACCC AGGATTTCGA TTTTCAAGCG
GCAACGCAAG CGCTGGCGCA GTTGCGGCAT ACCAGCGAAA CCCTCGTTTG GGCGCAAGGC
GGTCAGCAAT ATCGGGGCAT GCACGCGGCC ATCCCACTGC GAGATGGATC ATCGGGCGAG
CTTGATGTCC TGCTGGGGAT CAACACGGAC ATTCACGCCC ACTTCCTCCA CACCTTCCGC
GGGACGCTCG CTTTCTATAT CGCCGTCGCA GCGCTGGCCA CGGGCCTATT CGGCTGGTGG
GCTGCACGCC GAGGCCTGGC GCCTTTGCGC ACCATGGCCT CGCGGGCGCG CACGGTGACT
GCCGACAAGC TCGATGAACG CATGCCTGTT GATACCGTGC CAGTCGAAGT GGCGGACCTT
GCCGCGACCC TGAACGGCAT GTTGGAGCGC CTGCAGAACG ATTTCCGCCG CTTGTCGGAC
TTCTCGACCG ACATCGCCCA TGAACTGCGT ACGCCTATCA CGAACCTGCT CACGCAGACG
GAGGTCGTGC TATCCCAGCC GCGCGAGGGC ACGAAGTATC GCGATGTGCT GACCTCCAAT
GCGGAGGAAC TGCAGCGCCT GGCACGCATG GTGTCCGACA TGCTGTACCT CGCCAAGATG
GAGCACAGCC TGACGCTGCC AAGCGCCGAA GACATCCGCA TCGCTGACGA AATCCGCGCG
TTGTTCGATT TCTATGACGC GCTTGCAGAA GACAAGGCTG TCCTGCTCGA AACGCGGGGC
GATGGACACG TCACAGGAGA CCGGCTCATG CTGCGCCGTG CGTTGAGCAA CCTGCTCTCC
AACGCCATCC GGCACACCCC GCGACATGGC CGCGTGGTCG TCTCGGTCAG TGATGATCGC
GACGGCATGA CGGTTTCGGT AGACAACGAC GGCAGCGAGA TCGCGCCGCA GCTGCTGCCA
TTTATCTTCG AGCGCTTTTT CCGGGCGGAC AAATCGCGCG CGCGGCCCGA GTCGGAAAGT
GCCGGCCTTG GCTTGGCCAT CACCAAAGCG ATCGTTGCGG CGCACGGCGG CACCATCACC
GTTGCGCGCA TTGACGGGCG CACACGGTTC TCTATCCGCC TACCGCGTTG CATCGATGCC
GCAATATTGT CTGTATAG
|
|---|
| Protein sequence | MGQFSLTTRL TAYFSLCSAA VLLGLGVVIA LAMDQHFAVE DYTALRENVS VIEKIVESSP
AEQVPERIRE AIQHRTDLVA RIQGSDGHML YVTQDFDFQA ATQALAQLRH TSETLVWAQG
GQQYRGMHAA IPLRDGSSGE LDVLLGINTD IHAHFLHTFR GTLAFYIAVA ALATGLFGWW
AARRGLAPLR TMASRARTVT ADKLDERMPV DTVPVEVADL AATLNGMLER LQNDFRRLSD
FSTDIAHELR TPITNLLTQT EVVLSQPREG TKYRDVLTSN AEELQRLARM VSDMLYLAKM
EHSLTLPSAE DIRIADEIRA LFDFYDALAE DKAVLLETRG DGHVTGDRLM LRRALSNLLS
NAIRHTPRHG RVVVSVSDDR DGMTVSVDND GSEIAPQLLP FIFERFFRAD KSRARPESES
AGLGLAITKA IVAAHGGTIT VARIDGRTRF SIRLPRCIDA AILSV
|
|---|
| |