| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1590 |
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| Symbol | |
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| ID | 6287301 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1680183 |
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| End bp | 1681613 |
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| Gene Length | 1431 bp |
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| Protein Length | 476 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642625154 |
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| Product | Carbohydrate-selective porin OprB |
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| Protein accession | YP_001899160 |
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| Protein GI | 187928673 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3659] Carbohydrate-selective porin |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTGTTTC TTTCGATGCT GCAATACGCT TGGGTCGCAG TACGTCCGCT GGTTCTGGCA
CGCGCCGCAG CGCTTGGCCG TCCAGCGTTG TTGGCTGTGA TCACGCTGCT GTCGGTTTGT
GCGCAGGCTG CCCGCGCGGA AGAGGCCCCG GTTGCCGATG CACCGCTGAT CGCCAGTGGT
GAATTGGGCG ATCGCTTTGG ATTCCATGGC CAATCGACGT GGGTCTGGCA AGCCAAGCCG
GCATTCAACG CGCCGTACAG CGGCGACAAC AGCCTGACAC CGGGCCGCGC CACCAGCTAT
TCCTTCAGCA CCACGCTGGA TTTGGGCATG CGGCTGTGGA AGGGCGGGGA GTTCCACTTC
AACCCGGAAG TGGTGATGGG CAAGGCTTTC TCCGATCTGC ATGGTTTGGG CGGCCCAACC
AACGGGGAGT TGGCCAAGGT CACTGGCACC GACCCGACGC TGTATCGCGC CCGTGTTTTC
ATGCGTCAGA CCTGGGGACT GGGCGGCGAT ACGGAAAAGG TCGACGCCGA CTTCAACCAG
TTCGCCGATG TGGTCGACAA GCGCCGCGTG GTACTGACCG TGGGCAACCT GCCAGTGCTC
GATGTGTTCG ATGCCGTGGA ACATGCGCAT GACCCGCGCA CACAGTTTCT GAACTGGTCA
TTCATGACGC ATCCATCTTT CGACTATCCC GCCGATGCGC GCGGCTACAG CTGGGGCGTG
GCGCTGGAAT ATATCGACAG CGAACTCGGC TGGGCTGTCC GCGCAGGCCG TTTCCTGCAA
CCGGTGGAGT CCAATGGTTT GCCGCTCGAC ACGCGCTTTC TCAAGCACTA TGGCGACATG
CTCGAGCTGG AAAAGAGCTA CACGCTGTTC GGCCAGGAGG GCAAGGTGCG CCTGCTGGGT
TGGCGCAACT TAGCGCGCAT GGGCCGCTTT GATGATGCGA TTGCGCTCGG GCAGGCCACC
GGTGCCGCGC CAGACCTGAG CCAGGTGCGG CGCGAGCACG CCAAGGTGGG CGTGGGCCTG
TCGTTCGAGC AGAAAGTGGG CGAAAACCTG GGCCTGTTCA CCCGCCTGAA CTGGTCGGAT
GACAAGACTG AGACCTATGC TTTTACCGAG GCGGGCCGCA ACGTGTCGTT CGGCGGTCTG
CTCAAGGGCA CGTCCTGGCG GCGGCCGAAT GATGTGCTGG GAGCGGCCTT TTCGCTCAAC
ATGCTGGGCC CGGATCATCG TGCCTATCTG GCGGCGGGCG GCAGCGGCGC CTTCCTGGGT
GACGGCGCGC TGAACTATGG CCACGAGCGC ATACTCGAAG TGTTCTACAG CTTTCAACCG
GTCAAGGGCA TCACGCTCAG CCCCGATTTT CAGTTGATCC AGAACCCCGG TTACAACCGG
GACCGCGGGC CTGCCAAGTT CTTTGGCATT CGTGCCCACG CGGAGTTCTA A
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| Protein sequence | MLFLSMLQYA WVAVRPLVLA RAAALGRPAL LAVITLLSVC AQAARAEEAP VADAPLIASG
ELGDRFGFHG QSTWVWQAKP AFNAPYSGDN SLTPGRATSY SFSTTLDLGM RLWKGGEFHF
NPEVVMGKAF SDLHGLGGPT NGELAKVTGT DPTLYRARVF MRQTWGLGGD TEKVDADFNQ
FADVVDKRRV VLTVGNLPVL DVFDAVEHAH DPRTQFLNWS FMTHPSFDYP ADARGYSWGV
ALEYIDSELG WAVRAGRFLQ PVESNGLPLD TRFLKHYGDM LELEKSYTLF GQEGKVRLLG
WRNLARMGRF DDAIALGQAT GAAPDLSQVR REHAKVGVGL SFEQKVGENL GLFTRLNWSD
DKTETYAFTE AGRNVSFGGL LKGTSWRRPN DVLGAAFSLN MLGPDHRAYL AAGGSGAFLG
DGALNYGHER ILEVFYSFQP VKGITLSPDF QLIQNPGYNR DRGPAKFFGI RAHAEF
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