Gene Rpic_1550 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1550 
Symbol 
ID6287045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1641434 
End bp1641967 
Gene Length534 bp 
Protein Length177 aa 
Translation table11 
GC content60% 
IMG OID642625115 
Productsingle-stranded DNA-binding protein 
Protein accessionYP_001899121 
Protein GI187928634 
COG category[L] Replication, recombination and repair 
COG ID[COG0629] Single-stranded DNA-binding protein 
TIGRFAM ID[TIGR00621] single stranded DNA-binding protein (ssb) 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.202411 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones43 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTCAG TCAACAAGGT CATCATCGTG GGCAACCTCG GTGCTGATCC GGAAACACGT 
TACATGCCCA GTGGCGACGC GGTCACCAAC ATCCGCGTGG CAACCACCGA TCGCTTTAAG
GACAAGGGTA GCGGTGAGAT GCGCGAAGCC ACCGAATGGC ATCGCATCGC GTTCTTCGGT
CGCTTGGCGG AAATCGCTGG CGAGTATCTG AAGAAGGGAT CGTCGGTCTA CATCGAGGGT
CGTCTGAAAA CCCGTCAATG GGAGAAAGAC GGCCAGAAGC AATACAGCAC CGAGATTGTC
GCGGAGCAGA TGCAGATGCT TGGCGGCCGA CAGGGCGCCG GTGGTGAAAG TGAAGGCGGT
GGTGGTTACT CGCGCGGTGG CGATGATACT AGCGGTGGCC ATGGCGGTAG CCGCAGCCAG
GCTGGAGGAA TGAGCCGCAG CGCAGGCGGC AGTGGCCAGG GCAGTAGTGC ACGTCGTCAA
CCCGCGCCGT CCAACGGCTT CGAGGATTTT GACGACCCGG ACATCCCGTT CTAG
 
Protein sequence
MASVNKVIIV GNLGADPETR YMPSGDAVTN IRVATTDRFK DKGSGEMREA TEWHRIAFFG 
RLAEIAGEYL KKGSSVYIEG RLKTRQWEKD GQKQYSTEIV AEQMQMLGGR QGAGGESEGG
GGYSRGGDDT SGGHGGSRSQ AGGMSRSAGG SGQGSSARRQ PAPSNGFEDF DDPDIPF