Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1528 |
Symbol | |
ID | 6289725 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1620722 |
End bp | 1621933 |
Gene Length | 1212 bp |
Protein Length | 403 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642625093 |
Product | conjugation TrbI family protein |
Protein accession | YP_001899099 |
Protein GI | 187928612 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2948] Type IV secretory pathway, VirB10 components |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGGCTAAGC AGGTTGAGGA CGTGACCGAC GCTCGCGAGC GAGTCTCCAA GGGGAAGATC CCCAAAGGGA TTATCTACGT CGCAGCAGGC ATTGCTGCGG TGCTGATCGG CACGCTTGCC TTCTACTACC AGAGCAAAAC CGACGCCGAA GTGAAAGAGG CGTCGGAGGA GCAGCGCGCG GAGAAGATGA AATCGCGGGC GACGGCGGGT GAGGCGTCGC AGAACCTCGG CCAGCAGATC CGTGCCCAGC AGCAGGCCGC CAAGGATGAG GCGTCCCGCC AAGAGGCCTC TGCGGTAAGA GCCGACTCCG GTCAGCGCGC ACCGGTCATG TCGGCGAAAG ACTTCACGAC GGGCCGTCAG GGCACCGAGG TGATGGGGAA GAAGAATGAA GAGGACAGCA TCTTTACTGC GCCGCTCTAC AAGGCAGGCA TGAACAAGGT GCGTGACAAC GCACGCCCGA AAGTCGACCT TCAAGGTACG CTGGACCCTG CGTCCATGCG GGCGATGCAG CAGGCTGCCG CAGCGGCTGC CAACGCAACC GGCGCACCGC CTGCTGATGC TGCGCCCGTC AACAGCGATC AACAGTTTCT GAAACAGACA GCAGCAACGA AGTACGAGCG CACAGGTATT GCGGGCCGTT TGCCGAGTTG CACCGTATCC CAGGGCTTTG TGATTCCAGC GACGTTTGTC GGCGGCAACA ACTCGGATAA GCCGGGCGAG TTTCGCGCGA TGGTGTCGCA GAACGTATGG GACACGGTGG ATGGCACCTG CCTCGCGATT CCGGCAGGTT CGATGCTGGT TGGGACTTAC AGCAGCGACA TCAGCATCGG GCAGGAGCGC CTTCTCGTGG CGTTCACCCG TCTGCAGCTC CCCAATAAGA AGTGGGTTCC TCTCGGCTCG ATGCAGGGTG CCGACACCAA TGGCTATTCC GGTGTGAGCG GGGACGTCAA CAACCATTTC TTCAAGATCT TCTATGGCGC GGTTGTCATC GCCGTGCTGG AGCAACGCTT CAACAATCAG CAGACGGCGA CGACCTCCAA TTCGAACGGC CTGACTACTT ACGGCAACGC GGCGGGCCAG GTCGCCACAC AGACGGCGCA GACCATCCTG AACCGCAACC AGAACATTCG GCCGACCATC ACCACGGAAC CTGCCCAGAA GCTGTTGGTA CAGGTCAAGC AAGACATCGT CCTGGAGCCG TACCGTGAAT AG
|
Protein sequence | MAKQVEDVTD ARERVSKGKI PKGIIYVAAG IAAVLIGTLA FYYQSKTDAE VKEASEEQRA EKMKSRATAG EASQNLGQQI RAQQQAAKDE ASRQEASAVR ADSGQRAPVM SAKDFTTGRQ GTEVMGKKNE EDSIFTAPLY KAGMNKVRDN ARPKVDLQGT LDPASMRAMQ QAAAAAANAT GAPPADAAPV NSDQQFLKQT AATKYERTGI AGRLPSCTVS QGFVIPATFV GGNNSDKPGE FRAMVSQNVW DTVDGTCLAI PAGSMLVGTY SSDISIGQER LLVAFTRLQL PNKKWVPLGS MQGADTNGYS GVSGDVNNHF FKIFYGAVVI AVLEQRFNNQ QTATTSNSNG LTTYGNAAGQ VATQTAQTIL NRNQNIRPTI TTEPAQKLLV QVKQDIVLEP YRE
|
| |