Gene Rpic_1490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1490 
Symbol 
ID6289240 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1579275 
End bp1580141 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content58% 
IMG OID642625055 
ProductMethyltransferase type 11 
Protein accessionYP_001899061 
Protein GI187928574 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0000818174 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGCATATCT GTGTAAATTG CCATGCGCCT CTGAGGCCTT TTGCTTGGTC GTGCAATGCC 
TGCGGCTGGA GAGCCGCCGT CCATGACGGA GTCGCTTGCT TGGCGCCCGA AATGCTTCAG
GACAACGACG GCTTCCACGA GCCGCTGTTC GACGAATACC AAAAGCTTCA AGCCGAGCAC
TTTTGGTTCG TGTATCGCCG AAAGTTAATC GTGTGGGCGC TGCAACGTTA TTTCCCGCGG
CTTCAGTCCT TCTTGGAGAT TGGCTGCGGC ACAGCAGAGA ATCTCGCTGC GATTGCAGAC
CGGTTCCCAC ATGCTGAGGT ATGCGGTGGG GAGCCTTCGC TGCATGCGCT GCAAATGGCG
CGCCGCCATT GCACAGCGAA GTTCTTGCAA ATGGACGCGC GCGCGATCCC TTTTGTCGAA
GCATTCGACG TGGTCAGCGC CTTTGATGTG ATCGAGCATA TCGATGATGA CCGACTCGCC
CTGCGCGAGA TGTACAAGGC GTGCCGGCGC GGAGGTGGGC TGATCTTGAC GGTGCCTCAG
CATCCTTCTC TCTGGAGTCG CGTGGACGAC GCGGCCAAAC ACAAGCGTCG TTATACGCGT
AAGGATCTCG TGGAGAAGCT GCGGGCCACC GGGTTCCGTC CGCTCTACGT CAATTCCTTC
ATGTCGCTGC TGTTACCCGT CATGGTTATT TCGCGCGTGC ACCAGAAGAT TGCGCGGACC
GATCTGGAGG TTGACGAGGG TTTCCGCATC GGAAAGACAC TCAATCGGCT GTTTTCGACC
GTCTGCGACG TTGAATATCG CTTGTTGACC CGCAGCTTGC CATTTCCCGC CGGTGGTTCG
CTGCTCGCTG TCGCGGTCAA GGAGTGA
 
Protein sequence
MHICVNCHAP LRPFAWSCNA CGWRAAVHDG VACLAPEMLQ DNDGFHEPLF DEYQKLQAEH 
FWFVYRRKLI VWALQRYFPR LQSFLEIGCG TAENLAAIAD RFPHAEVCGG EPSLHALQMA
RRHCTAKFLQ MDARAIPFVE AFDVVSAFDV IEHIDDDRLA LREMYKACRR GGGLILTVPQ
HPSLWSRVDD AAKHKRRYTR KDLVEKLRAT GFRPLYVNSF MSLLLPVMVI SRVHQKIART
DLEVDEGFRI GKTLNRLFST VCDVEYRLLT RSLPFPAGGS LLAVAVKE