| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1472 |
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| Symbol | |
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| ID | 6289047 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1564454 |
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| End bp | 1565260 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642625037 |
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| Product | transposase IS4 family protein |
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| Protein accession | YP_001899043 |
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| Protein GI | 187928556 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3293] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.592083 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0000000061628 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGAGAAAC GCAGACCGTA TCCGAGCGAC GTGAGTGACG AAGAATGGAG CTTCGCGGCG
CCGTATTTGA CGTTGATGAA CCAAGACGCG CCGCAGAGGC GATATGAATT GCGAGAGCTG
TTCAACGCGC TGCGTTGGCT GGCACGCGCG GGGGCCGCAT GGCGCATGCT GCCGACGAAC
TTTCCGCCCT GGGAGGCTGT GTACCAGCAG ACGCAACGCT GGCTGCGAGG GGGCTGTTTT
GAGGCCATGG TTCAGGATTT GCGTTCGGTG CTGCGCGTGG CGCAAGGGCG GCAAGGTCAG
CCGAGTGCAG TCATTCTCGA CGGGCGTACG CTGCAATCGA CGTGCGAGAG CGGTCCGCGC
GCGGGTTACG ACGGCTACAA GCGCAAACGG GGAAGCAAGG TGCATATGGC CGTCGATACA
CTCGGGCATT TGCTGGCAGT TCATATCACG CCGGCCAATG AACAAGAGCG CGCGCAAGTT
CAGGTGTTGG CACGAGAGGT TCAGCTTGTG ACCGGGCAGA CTGTAAAGCT TGCTTTTGCC
GACCAGGGTT ATACGGGCGA AGAACCAGCG CAAGCCGCGC GGGACGAAGG CATCGAATTG
CAGGTCATCA AACTGCCAGA GGCGAAGAAA GGCTTTGTCC TGCTGCCACG CCGATGGGTC
GTCGAGCGCA GTTTCGGATG GCTCAATCGG TTTCGAAGAC TCGCACGCGA CTACGAGCGC
TTGCCTGAAA CACTCGCCGG CTTGCATTTC GTCGTCTTTG CCATGCTCAT GCTCGTTCAC
GCCGCACCTG TCGTCCAAAG TGCATAA
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| Protein sequence | MEKRRPYPSD VSDEEWSFAA PYLTLMNQDA PQRRYELREL FNALRWLARA GAAWRMLPTN
FPPWEAVYQQ TQRWLRGGCF EAMVQDLRSV LRVAQGRQGQ PSAVILDGRT LQSTCESGPR
AGYDGYKRKR GSKVHMAVDT LGHLLAVHIT PANEQERAQV QVLAREVQLV TGQTVKLAFA
DQGYTGEEPA QAARDEGIEL QVIKLPEAKK GFVLLPRRWV VERSFGWLNR FRRLARDYER
LPETLAGLHF VVFAMLMLVH AAPVVQSA
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