| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1461 |
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| Symbol | |
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| ID | 6289162 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1552573 |
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| End bp | 1553553 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 642625028 |
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| Product | protein of unknown function DUF534 |
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| Protein accession | YP_001899034 |
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| Protein GI | 187928547 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2984] ABC-type uncharacterized transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.655823 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000000785059 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCACGT TCAAGCACGC CTTCCGCATT GCCGCGCTTG CCGCCATTCC GATGGCACTG
CTGCAAGCCG CACCGGCACT GGCCCAGGCC ACCAAGTCGG TCGAAGTGCT GGCCATCGTT
GAGCACCCGG CGCTCGACGC CATCCGCGAT GGCGCCAAGG AACAACTCAA GGCCGAAGGC
TTTGACGCAG GCAAGAACCT GAAGTGGGAA TACCAGAGCG CACAAGGCAG CACGGCCACC
GCCGCGCAGA TTGCCCGCAA GTTCATCGGC GACAAGCCGG ACGCCATCGT CGCCATCGCT
ACCCCGTCGG CGCAGGCCGT TGTGGCTGCC ACCAAGTCGA TCCCCGTCGT GTATTCGGGC
GTGACCGATC CGGTTGCCGC ACAACTGGTC AAGAGCTGGG CGCCGACCGG CACCAACGTG
ACCGGCGTGT CTGACAAGCT GCCGCTGGAC AAGCAGATCG CCCTGATCAA GCGTGTGGTG
CCCAATGCCA AGCGCGTGGG CATGGTCTAC AACCCGGGCG AAGCCAACTC GGTCGTGGTC
GTCACCGAGC TGAAGAAGCT GCTGTCGGCG CAAGGCATGA CGCTCGTCGA GTCGGCAGCT
CCGCGTACGG TGGATATCGC GCCGGCCGCC AAGAACCTGA TCGGCAAGGT CGACGTGATC
TACACGAACA CCGACAACAA CGTGGTGTCG GCGTACGAAT CGCTGGTGAA GGTGGCCAAC
GAAGCGAAGA TCCCGCTGGT GGCCGGCGAT ACCGACAGCG TCAAGCGTGG CGCCATCGCT
GCACTGGGCA TCAACTACTA CAAGCTGGGC CAGCAGACCG GCAAGGTCGT CGCCCGCATC
CTGAAGGGTG AGAAGCCGGG CGCGATTGCG TCGGCCGGCA GCTCCGACCT GGAGCTGTTC
GTGAACGAAG GCGCAGCCAA GAAGCAAGGC GCCACCCTGT CGGCGGACCT GCTGAAGGAC
GCCAAGGAAG TCATCAAGTA A
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| Protein sequence | MSTFKHAFRI AALAAIPMAL LQAAPALAQA TKSVEVLAIV EHPALDAIRD GAKEQLKAEG
FDAGKNLKWE YQSAQGSTAT AAQIARKFIG DKPDAIVAIA TPSAQAVVAA TKSIPVVYSG
VTDPVAAQLV KSWAPTGTNV TGVSDKLPLD KQIALIKRVV PNAKRVGMVY NPGEANSVVV
VTELKKLLSA QGMTLVESAA PRTVDIAPAA KNLIGKVDVI YTNTDNNVVS AYESLVKVAN
EAKIPLVAGD TDSVKRGAIA ALGINYYKLG QQTGKVVARI LKGEKPGAIA SAGSSDLELF
VNEGAAKKQG ATLSADLLKD AKEVIK
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