| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1455 |
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| Symbol | |
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| ID | 6286698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1546442 |
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| End bp | 1548070 |
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| Gene Length | 1629 bp |
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| Protein Length | 542 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642625022 |
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| Product | long-chain-fatty-acid--CoA ligase |
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| Protein accession | YP_001899028 |
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| Protein GI | 187928541 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0933982 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0000905753 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCCCTGA TGGGACAAAT GATGAGCGCT CCGTTGCTCA TCTCGACCAT CATCGAACAT
GCAGCGCGCA ATTCCGGTTC GACTGAAGTC GTGTCGCGCC GTGTCGAGGG CGATATCCAT
CGCACCACGT ACCGGCACGT GCGAGACCGT TCCAAGCAAC TGGCGAATGC GCTGGCCGCA
CTGGGCGTGC AGCCCGGCGA ACGCGTCGGT ACGCTGGCCT GGAACGGCTA TCGCCATCTT
GAAATCTATT ACGGCGTCTC CGGTTCGGGC TCGGTGTGCC ACACCATCAA CCCGCGGCTG
TTTCCTGACC AGATCGCCTA CATCGTCAAT CACGCAGACG ATCAGTACGT TTTCTTCGAC
CTGACGTTCG TGCCGCTCAT CGAGGGCATC GCCCCGCACT GCCCGAACGT GAAGGGCTGG
GTGGCGATGA CCGATCGCGC GCACATGCCC ACTTCCAGCG TGCCGATGCT CTGCTACGAA
GAGCTGCTGG ACGCGCAGAG CGCCGACTAC ACCTGGCCGC AGTTCGACGA GAACACCGCA
GCAGGCCTGT GCTACACGTC GGGCACTACG GGCAACCCGA AGGGCGCGTT GTACTCGCAT
CGATCCACAG TGCTGCATTC GTATGCGTCT GCATTGCCCG ATGCGCTCGG GTGCTCGGCG
CAGGACGTGA TTCTGCCGGT GGTGCCGATG TTCCACGTCA ACGCGTGGGG GCTGCCGTAT
TCGGTGCCGC TGGTGGGCGC CAAGCTCGTC TTCCCGGGGC CGAAACTGGA TGGCGCTTCG
CTGTTCGAAC TGTTCGAGCA GGAGAAGGTC ACGTTCTCCG CCGGCGTGCC GACGGTATGG
CTGGGCCTGC TGCAACACGT GCAGGCCAAC AAGCTGAAAT TCTCGACGTT CCGCAAGACC
GTGATTGGCG GCTCGGCTGC GCCGCCGGCC ATGATCCGTA CGCTCAAAGA ACTGGACGTC
GAAGTCATCC ACGCGTGGGG CATGACGGAA ATGTCCCCGC TGGGCACCAC GTGCAAGCTG
ATGGGCAAGC ATGCCGACCT GCCGGACGAG GCCAAGCAGC ATGTGCTCGA ACGTCAGGGC
CGCGCCATCT ACGGCGTCGA GATGAAGATC GTCGATGCCG AGGGCCACGA ACTGCCGTGG
GACGGCAAGG CTTTCGGCGA TCTCTACGTG CGCGGGCCTT GGACCATTCA GAGCTATTAC
CGCAACGAAG TGTCGCCGCT GGTTGATGGC TGGTTCCCGA CGGGGGACGT GGCCAATATC
GATGCCGATG GCTACATGCA GATCACAGAT CGGAGCAAGG ACGTGATCAA GTCGGGCGGT
GAGTGGATTT CGTCCATCGA TGTGGAAAAC GTGGCCGCTG CGCACCCCGG CGTGCACATG
GCCGCATGCA TCTCGTGCCA CCACCCGAAG TGGGACGAGC GCCCGTTGCT GGTGGTGATG
AAGAAGCCAG GTGTGGAACT CACGCGTGAG GAGATGCTCA AGTTCTTCGA AGGCAAGGTT
GCCAAATGGT GGATTCCGGA TGACGTGGTG TTTGTCACCG AAATTCCGCT CACGGCCACC
GGCAAGATGC AGAAGCTGAA GCTGCGCGAG CAGTTCAAGG ATTATCAGTT CCCCGCTGTA
CAGGCTTAG
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| Protein sequence | MALMGQMMSA PLLISTIIEH AARNSGSTEV VSRRVEGDIH RTTYRHVRDR SKQLANALAA
LGVQPGERVG TLAWNGYRHL EIYYGVSGSG SVCHTINPRL FPDQIAYIVN HADDQYVFFD
LTFVPLIEGI APHCPNVKGW VAMTDRAHMP TSSVPMLCYE ELLDAQSADY TWPQFDENTA
AGLCYTSGTT GNPKGALYSH RSTVLHSYAS ALPDALGCSA QDVILPVVPM FHVNAWGLPY
SVPLVGAKLV FPGPKLDGAS LFELFEQEKV TFSAGVPTVW LGLLQHVQAN KLKFSTFRKT
VIGGSAAPPA MIRTLKELDV EVIHAWGMTE MSPLGTTCKL MGKHADLPDE AKQHVLERQG
RAIYGVEMKI VDAEGHELPW DGKAFGDLYV RGPWTIQSYY RNEVSPLVDG WFPTGDVANI
DADGYMQITD RSKDVIKSGG EWISSIDVEN VAAAHPGVHM AACISCHHPK WDERPLLVVM
KKPGVELTRE EMLKFFEGKV AKWWIPDDVV FVTEIPLTAT GKMQKLKLRE QFKDYQFPAV
QA
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