| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1439 |
|---|
| Symbol | |
|---|
| ID | 6289125 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | - |
|---|
| Start bp | 1526522 |
|---|
| End bp | 1527370 |
|---|
| Gene Length | 849 bp |
|---|
| Protein Length | 282 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642625006 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001899012 |
|---|
| Protein GI | 187928525 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0235] Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.553076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.0119632 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCAC CTGCAACCAC CCAAGCCAAG CGGCCCGACA GCATGGCCGC CAGTCTCAGC
CCCGAGGCTG CCGCGCGCTA TCGCAACCTG CCGCGCCCGC CGCAATTTGC CACCGTTGAA
GAAGAGCGCC TGCATCGCAA ACAGCGCCTG GCTGCGGCGT TTCGCTTGTT CTCCAAATTC
GGTTTCGACG AAGGTGTGGC CGGACACATC ACGGCGCGCG ATCCGGAACA CCAGGACAGC
TTCTGGGTGA ACCCGTTCGG TGTGCATTTC AGCCAGGTGA CGGTATCGAA CCTGATCCGC
TGCGATCACC ACGGCAACGT GGTGGAAGGG GATTACCCGG TCAACGCCGC AGCGTTTGCG
ATTCACTCGC GCGTGCACCA GGCGCGCCCC GACCCGGTGG CCGCTGCGCA CTCGCACAGC
ACGTACGGAC GGGCGTGGTC GACGCTCGGC CGCAAACTCG ACCCGCTTAC GCAAGACGTG
TGCGCCTTTT ATGGCGACCA CGCTGTGTAT GACGATTTCG GCGGCGTAGT GGTCGAGCTG
GACGAAGGCC AGCGCATTGC AGAAGCGCTG GGCGACAACA AGGCCGCCAT CCTGCAGAAC
CATGGCCTGC TGACGGTCGG CAAGACGGTC GACGAAGCAG CGTGGTGGTT CATCACGATG
GAGCGCTCCT GCCAGGTGCA GTTGCTGGCC GAAGCCGCTG CGGCGCGCAC CGGCGACGCA
CTACGCACGA TTTCCGATGC CGCTGCCCGC CAGGCGTATT CCATCGTCGG ATCGGCGCAG
GCGGGGTGGT TCCAGTTCCA GCCGCTGTAT GCGCGCATCG TCAAAGAACA ACCCGATCTG
CTCGACTGA
|
|---|
| Protein sequence | MNAPATTQAK RPDSMAASLS PEAAARYRNL PRPPQFATVE EERLHRKQRL AAAFRLFSKF
GFDEGVAGHI TARDPEHQDS FWVNPFGVHF SQVTVSNLIR CDHHGNVVEG DYPVNAAAFA
IHSRVHQARP DPVAAAHSHS TYGRAWSTLG RKLDPLTQDV CAFYGDHAVY DDFGGVVVEL
DEGQRIAEAL GDNKAAILQN HGLLTVGKTV DEAAWWFITM ERSCQVQLLA EAAAARTGDA
LRTISDAAAR QAYSIVGSAQ AGWFQFQPLY ARIVKEQPDL LD
|
|---|
| |