Gene Rpic_1427 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1427 
Symbol 
ID6287662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1516246 
End bp1517286 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content66% 
IMG OID642624994 
Productfolate-binding protein YgfZ 
Protein accessionYP_001899000 
Protein GI187928513 
COG category[R] General function prediction only 
COG ID[COG0354] Predicted aminomethyltransferase related to GcvT 
TIGRFAM ID[TIGR03317] folate-binding protein YgfZ 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.345601 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.255059 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATGATG TCTTCCACGA TTTTGTCGAT ACGCTGAGCT TTCCTCCGCT CGACGTGCAA 
TTTGATGCCG CCACGCGCGG CAGCGTGCTG TGTGCGCCGA CCGATCTGGC GCGCATCGCT
GTCGAAGGCG CCGATGCCGC CGAGTTCCTC CATAACCAAC TCACCAACGC CGTGACCGGC
CTGGGCCTGA ACCAGGCGCG ACTGGCGGGC TATTGCTCGC CCAAAGGACG GCTGCTTGCC
ACCCTGCTGG TATGGCGCCA GGCCGATACG ATCGTGCTGC AGACAGACAA GCTGATCGCG
CCCGCGTTGA CCAAGCGCCT GTCGATGTTC GTGCTGCGCG CCAAGGCCAA GCTGCGCCCG
ATGGACGAGT TCATCGCCAT CGGCGTCGCC GGGCCTGACG CGGCGGAAGC GCTGCGCGAG
GCTGGTGCCG TGCTGCCTGA ACCCGATACC GTCAACGCGG TGGCGCAGCA GCCTGCCACG
GTCGGCCAGC AATTCGGCGC CGTCGTCCGC CTGCCGGATG CCGGCGGCCG CCCGCGCTAT
CAATGGATGG TGCATGCCGA GCACTTCCAG GACGCCTGGA AGACGCTGTC GTCGCGGCTG
TCGCTGGTCG GCACCGAGGT GTGGGATTGG CTGAGCCTGC AGGCAGGTGT GCCGCACATC
ACCCTGCCCA CACAGGAGCA GTTCGTCCCG CAGATGGTGA ACCTGGAACT GCTGGGCGGC
GTCGATTTCC GCAAGGGTTG TTATCCGGGG CAGGAAATCG TGGCACGCAG CCAGTATCGC
GGCACGCTCA AGCGGCGCAT GCAGCGCGCG CACGTCAATG CCCCCACGTC GGCCGGCGCC
GAGGTCTACA GCGCAGCCGA TCCGAACCAA CCGTGCGGCA TGGTGGTCAA TGCAGCCATG
GCGCCGGATG GCGGGACCGA TCTACTCGTC GAATTGAAGC TGGACGCCCT CGACACCGTC
ATCCACCTGG CCACGCCGGA CGGCCCGATG CTGACGCTGC AAGAACTGCC GTACGTCATT
CCCGCTTCAG AAAACGCCTG A
 
Protein sequence
MNDVFHDFVD TLSFPPLDVQ FDAATRGSVL CAPTDLARIA VEGADAAEFL HNQLTNAVTG 
LGLNQARLAG YCSPKGRLLA TLLVWRQADT IVLQTDKLIA PALTKRLSMF VLRAKAKLRP
MDEFIAIGVA GPDAAEALRE AGAVLPEPDT VNAVAQQPAT VGQQFGAVVR LPDAGGRPRY
QWMVHAEHFQ DAWKTLSSRL SLVGTEVWDW LSLQAGVPHI TLPTQEQFVP QMVNLELLGG
VDFRKGCYPG QEIVARSQYR GTLKRRMQRA HVNAPTSAGA EVYSAADPNQ PCGMVVNAAM
APDGGTDLLV ELKLDALDTV IHLATPDGPM LTLQELPYVI PASENA