| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1369 |
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| Symbol | |
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| ID | 6286961 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1467388 |
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| End bp | 1468584 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624937 |
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| Product | benzoate transporter |
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| Protein accession | YP_001898943 |
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| Protein GI | 187928456 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3135] Uncharacterized protein involved in benzoate metabolism |
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| TIGRFAM ID | [TIGR00843] benzoate transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00588057 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 0.16803 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATCCAT CGAGCACGCA AACGGCCTCG CGCGGGGCGC TGTCCGATTG GTCCCTCTCG
GCCGTCGCGG CGGGGTTCCT GGCCGTGCTG ATTTCGTATG CGGGGCCGCT GGTCATCTTC
TTCCAGGCGG CGCAGGCCGC GCATGTGCCG GATGCGATGG TGGCGTCGTG GGTCTGGGCG
ATCTCCATTG GCGCGGCGGT GTCCGGCATC TACGCGAGCT GGCGGTGGAA AGCCCCGGTG
GTAACGGCGT GGTCGGCGCC GGGGACGGCG TTGCTGGTAT CGCTGTTCCC GGGGCTGTCG
CTCAATGAAG CGGTGGGGGC GTACATCACG GCGGCCGTCG TCATTCTGTT GATCGGCGTG
TCGGGCACGT TCGACCGGCT CATGCGGCTG ATTCCCAAGG GCATCGCCGC GGGCATGATG
GCGGGCATCC TGTTCCAGTT CGGTACCCAC GCGTTTGCCG CGGCTTCTGC CATGCCGGTG
CTGGCGTTTT CCATGATCGC CATCTACGTG GTGGGCCGGC GCTGGTGGCC GCGCTACTGC
ATCGTCGTGG TATTGCTGGC CGGGATTGCG CTGGCAATGC CCCTGGGGCT GACGCATTTT
GACGGTGTCA CGCTGGAATT CACCCATCCG GTCTTCATCG CCCCACACTG GGCCCTGAGT
TCGACGCTGA GCCTGGCCAT CCCGCTCGTC GTCGTCAGCC TCACGGGGCA GTTTTTGCCC
GGCATGGCGG TGCTGCGCGG CTCCGGGTAC GACATCCCGG CCAAGCCGAT CATGACGGCC
ACCAGCGTGG CATCGATCAG CGTGGCGTTT TTCGGCGGCA TCACCATCGT GATCGCCGCG
ATCACTGCCG CGTTGTGCAC TGGCAAGGAT GCACATGACG ACCCGTCCAG GCGCTACGTG
GCCGGTATCG CCAACGGAGT GTTCTACCTG ATTGGCGGCA CGTTTGCGGG TGCCATCGTG
ATGCTGTTTG CGGCGCTGCC CAAGCCGTTC GTGGCCATCC TGGCCGGGCT GGCGCTGATT
GGCGCTATCG CCTCGAACGT GATGGGGGCG ATCGAAGATG GCGAGCACCG GGAGGCGTCG
ATCATCACCT TCCTGGCGAC GGCGTCCGGG TTGACGCTGT TCGGGTTGGG CTCGGCATTC
TGGGGAATTG TGATCGGCTC GGCGGCGGCG CTTGTCTTGA GGCCGGCGCA GCGATAG
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| Protein sequence | MHPSSTQTAS RGALSDWSLS AVAAGFLAVL ISYAGPLVIF FQAAQAAHVP DAMVASWVWA
ISIGAAVSGI YASWRWKAPV VTAWSAPGTA LLVSLFPGLS LNEAVGAYIT AAVVILLIGV
SGTFDRLMRL IPKGIAAGMM AGILFQFGTH AFAAASAMPV LAFSMIAIYV VGRRWWPRYC
IVVVLLAGIA LAMPLGLTHF DGVTLEFTHP VFIAPHWALS STLSLAIPLV VVSLTGQFLP
GMAVLRGSGY DIPAKPIMTA TSVASISVAF FGGITIVIAA ITAALCTGKD AHDDPSRRYV
AGIANGVFYL IGGTFAGAIV MLFAALPKPF VAILAGLALI GAIASNVMGA IEDGEHREAS
IITFLATASG LTLFGLGSAF WGIVIGSAAA LVLRPAQR
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