Gene Rpic_1348 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1348 
Symbol 
ID6286119 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1443938 
End bp1444969 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content65% 
IMG OID642624916 
Productprotein of unknown function DUF182 
Protein accessionYP_001898922 
Protein GI187928435 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1975] Xanthine and CO dehydrogenases maturation factor, XdhC/CoxF family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.385014 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0761003 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAGCG TCGATCTTGA AGTCTTGAAA ACCAGCGTTC GCTGGCTAGA ACAAGGGCGG 
CGCGTGCTGC TCGTCACGGT AGTCAAAACG TGGGGTTCGT CGCCGCGGCC CGAAGGCGCG
ATGCTCGCGC TGCGCGATGA CGGTGTCGTC ATCGGCTCGG TCTCGGGCGG CTGCATTGAA
GACGACCTCA TCGACCGCGT GCGCCGCGAA GGCCTGCATT ACACCAAGCC CGAAGCCGTC
AAATACGGCA TCAGCGCTGA AGAAGCGCAT CGCTTTGGGC TGCCTTGCGG TGGCACGCTG
CAACTCGTGC TGGAGCCGCT GAACGCTTCC AGCGGAATCG ACGCCCTGCT GCGCGCCGTG
GAAGCCGGTC AGCTCGTCGC CCGCACGCTC GACATGGCGA CCGGCGCCGC AACCCTGCAG
CACGCCACCG TCACTGACGG CCTGCAGTTC GACGAAGCGC GCCTCGTGAC GATTCATGGG
CCGCGCTACC GGATGCTCGT CATTGGTGCG GGACAGCTTT CGCGCTACCT GTGCCAGATC
GCCGTGGGCC TGGATTACCA GATCACCGTC TGCGACCCGC GCGAGGAATA CAGCGAAGAG
TGGTCAATTC CCGGCGTGGC CATGGTCCGC ACCATGCCCG ACGACACAGT GATGGCCATG
AAGCTCGACG AGCGCTGCGC CGTCATCGCC CTCACCCACG ACCCCAAGCT CGATGACCTC
GCGCTCATGG AAGCGCTCAA GACGCCAGCG TTCTACGTGG GCGCACTCGG CAGCCGCCGC
AACAACGCCA ACCGACGCGA GCGCCTCAAG GAATTCGATC TGAGCGATGC CGAGCTGGCG
CGCCTGCATG GGCCGGTCGG CATTTACATC GGCAGCCGAA CGCCGCCGGA GATCGCCATC
TCGATCCTGG CCGAGGTGAC GGCCGCCAAG AACGGTGTGT CGCTGCCGAC CATCCTGCAA
GTCGAAGGCG CCAAGGCTGC GCGCGAGATT GCCGCCAACG CCGCTTCGAG CTGCGCTGTG
CCGCAGAGTT GA
 
Protein sequence
MDSVDLEVLK TSVRWLEQGR RVLLVTVVKT WGSSPRPEGA MLALRDDGVV IGSVSGGCIE 
DDLIDRVRRE GLHYTKPEAV KYGISAEEAH RFGLPCGGTL QLVLEPLNAS SGIDALLRAV
EAGQLVARTL DMATGAATLQ HATVTDGLQF DEARLVTIHG PRYRMLVIGA GQLSRYLCQI
AVGLDYQITV CDPREEYSEE WSIPGVAMVR TMPDDTVMAM KLDERCAVIA LTHDPKLDDL
ALMEALKTPA FYVGALGSRR NNANRRERLK EFDLSDAELA RLHGPVGIYI GSRTPPEIAI
SILAEVTAAK NGVSLPTILQ VEGAKAAREI AANAASSCAV PQS