| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1330 |
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| Symbol | |
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| ID | 6286922 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1423674 |
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| End bp | 1424150 |
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| Gene Length | 477 bp |
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| Protein Length | 158 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642624899 |
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| Product | queuosine biosynthesis protein QueD |
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| Protein accession | YP_001898905 |
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| Protein GI | 187928418 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0720] 6-pyruvoyl-tetrahydropterin synthase |
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| TIGRFAM ID | [TIGR00039] 6-pyruvoyl tetrahydropterin synthase/QueD family protein
[TIGR03367] queuosine biosynthesis protein QueD |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.971287 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.314571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCAAGA CCGTTTCCAT TACGCGCCGG CTCGAATTCG ACGCCGGCCA CCGCATCCCC
GGCCATGCCG GCCAGTGCCG CAACCTGCAC GGGCATCGCT ATCAGCTCGA ACTCACGCTC
ACCGGCGAAG TCCTGCATAA CGACAAGGCT GCCGACGACG GCATGATCCT CGACTTTGGC
GACGTCAAGC AGCTCGCCAA CAAGCACCTC GTCGACCTGT GGGACCACGC GTTCCTCGTC
TATCGCGGCG ATACCAAGCT GGTTGAATTC CTGAACGACA TGGAAGGCGG CCACAAGACC
GTTGTGCTCA ACGACGTGCC CACCGTGGAG AATCTCGCGC AGGTCGCGTT CGATATTCTT
GAGCCGGTGT TCCGCAACGC GTTCGGGCAC CATCTGCGCC TGTCCAAGCT CGTGCTGTAC
GAAACCCCGA ATTGCTGGGC CGACGTGAAG CTCGCGCGTC CGCACGAACA GGATTGA
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| Protein sequence | MTKTVSITRR LEFDAGHRIP GHAGQCRNLH GHRYQLELTL TGEVLHNDKA ADDGMILDFG
DVKQLANKHL VDLWDHAFLV YRGDTKLVEF LNDMEGGHKT VVLNDVPTVE NLAQVAFDIL
EPVFRNAFGH HLRLSKLVLY ETPNCWADVK LARPHEQD
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