Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1288 |
Symbol | lpxD |
ID | 6287035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1384522 |
End bp | 1385595 |
Gene Length | 1074 bp |
Protein Length | 357 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642624858 |
Product | UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
Protein accession | YP_001898864 |
Protein GI | 187928377 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
TIGRFAM ID | [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.301363 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.582697 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTTTT CGCTTGGTGA ACTTGCTGCG TCGCTCGGCG CGACCGTCCA GGGTGACGCA GGCCTGATCG TCAAGTCGAT CGCGCCGCTG GATCAAGCGG GCGCCGATCA GCTCGCTTTT CTCTCCAATC CGCTGTACCT CAATCAGGCT GTGAGTTCCG GTGCGGGGGC GATCATCGTG TCGCCCCGCG ATCTGGAAAC GCTCGAAAGC CAGGGCCACG CTGCTGGCCG GAACTGGCTG ATTGCGGCCA ATCCGTATGC TGCGTTTGCG CGCGTTGCCC AGCGCTTTGT TGCGCTGGCC GCGCGCCCCG TTGTACCGGG CATTCACCGG ACTGCCAGCG TGGAAGAGGG CGCCAGGGTG CCGGCATCCT GCTCCATCGG CCCGAACGTC ACCATCGAAG CCGGTGCTGT GCTCGGCGAG CGTGTGCGCA TCGCCGGCAA CAGCTTTGTT GGCGCCGATG CCCGGATTGG CGACGACACG TTGCTCTACG CGAACGTTTC GATTTACCAC GGCTGCGTTG TTGGCGCGCG CTGCGTTCTG CATAGCGGCG TCGTGATCGG CGCCGATGGC TTCGGCTTTG CACCCGACTT CGGGCCGCAG GGCGGCGAAT GGGTGAAGAT TCCGCAGGTT GGCCGGGCCG TGATTGGTGA CGACGTGGAG ATCGGCGCAA ACACCGCCAT CGACCGTGGC GCGATGGCCG ATACGGTGGT CGAACAGGGC TGCAAGATCG ACAACCAGGT GCAGATCGCG CACAACGTGC ACGTGGGTGC CTATACCGTC ATCGCGGGCT GCGCGGCCAT TTCCGGCAGC ACGAAGATCG GGCGCTACTG CATCATCGGC GGTGCGGCCA ATTTTGCCGG CCACCTGACC ATTGCGGACC GCGTGACCGT TTCGGGCGGC ACATCCATTA CCAAATCCAT CACCAAGCCC GGTGGCCACT TCACCAGCGT TTTCCCGTTC ATGCCGCATG GCGACTGGGA GCGTAACGCG GCCATCGTCC GAGGCCTGAC GCGCATGCGC GAACGGTTGC AACAACTGGA ACAGCGGGTC AAAGACCTGC AGCAACAATC ATGA
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Protein sequence | MSFSLGELAA SLGATVQGDA GLIVKSIAPL DQAGADQLAF LSNPLYLNQA VSSGAGAIIV SPRDLETLES QGHAAGRNWL IAANPYAAFA RVAQRFVALA ARPVVPGIHR TASVEEGARV PASCSIGPNV TIEAGAVLGE RVRIAGNSFV GADARIGDDT LLYANVSIYH GCVVGARCVL HSGVVIGADG FGFAPDFGPQ GGEWVKIPQV GRAVIGDDVE IGANTAIDRG AMADTVVEQG CKIDNQVQIA HNVHVGAYTV IAGCAAISGS TKIGRYCIIG GAANFAGHLT IADRVTVSGG TSITKSITKP GGHFTSVFPF MPHGDWERNA AIVRGLTRMR ERLQQLEQRV KDLQQQS
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