| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1284 |
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| Symbol | |
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| ID | 6289310 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1378882 |
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| End bp | 1380072 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624854 |
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| Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| Protein accession | YP_001898860 |
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| Protein GI | 187928373 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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| TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.168651 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.194237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTT TGACCGTTCT TGGCGCCACT GGCTCCATTG GCGACAGCAC GCTCGACGTG
GTGCGCCGTC ATCCCGACAA ATACAGCGTT TTTGCGCTGA CCGCCAACGC GCAGGCCGAC
AAGCTCGCGG TGCTCTGCCG TGAGTTTCGC CCGAAGATGG CGGTGCTCGG TTCGGCGGCT
GCGGCGGATG CATTGCGTGA CCAACTGGGC ACAGAAGCTG CCGGCATCGA AATCTGTTCT
GGCACCAAGG CGCTGGAAGA GGCCGCCGCC CACCCTGACT GCGATGCCGT GATGGCCGCC
ATCGTTGGGG CGGCAGGTTT GCGCCCGACG CTTGCCGCCG TGCGCGCCGG CAAGCGCGTG
CTCCTGGCCA ACAAGGAGGC GCTGGTGATG TCCGGCGCGC TCTTCATGGA CGCCGTGCGT
GAGCATGGCG CCACCGTGCT CCCGATCGAC AGCGAGCACA ACGCCATCTT CCAATGCCTT
CCTCAGCAAG TTCCGCAGTT CGGGCGCGGC GTGTCGCGCA TCGTCCTGAC GGCATCAGGT
GGTCCGTTCC GTACGCGTGC CGTTGATTCG CTTGCTGATG TCACGCCCGA TCAGGCTTGC
GCGCATCCGA ACTGGGTGAT GGGGCGCAAG ATCTCCGTTG ACTCCGCCAC CATGATGAAC
AAGGGGCTGG AGGTGATCGA GGCGTACTGG CTGTTTGGCG TGCCGGTCGA GCATCTCGAA
GTGCTGATCC ACCCGCAGAG TGTCATCCAT TCGATGGTCG GCTACGACGA TGGCTCCGTG
CTGGCGCAGC TGGGCAATCC GGACATGCGC ACGCCGATTG CCTACGGCTT GGCCTACCCT
GAGCGCATTG AGGCCGGTGT TCCGCTGCTC GATCTCGTGA CCACAGGTGC ACTGACGTTC
GAGGCGCCGG ATCTGCGCCG CTTCCCGTGT CTGGCGCTGG CCTTTGATGC ACTGCGCGCC
GGTGGTACGG CACCTGCTGC TCTGAACGCG GCCAACGAGG TGGCTGTCGA AGCATTTTTA
CAGCGCCGCA TCCGGTTCAC CGAGATTGCT GCCGTGGTGG GTGACACGCT CGCCCGTACT
TCTATCGTGC CCGCCGACTC GCTCGACACC GTATTTGCGG CCGACGCCCA AGCGCGTCAG
CAGGCGGAGC GCTATATCGC GACCGCATGC GCGCAACTGC CGGCCGCCTG A
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| Protein sequence | MMRLTVLGAT GSIGDSTLDV VRRHPDKYSV FALTANAQAD KLAVLCREFR PKMAVLGSAA
AADALRDQLG TEAAGIEICS GTKALEEAAA HPDCDAVMAA IVGAAGLRPT LAAVRAGKRV
LLANKEALVM SGALFMDAVR EHGATVLPID SEHNAIFQCL PQQVPQFGRG VSRIVLTASG
GPFRTRAVDS LADVTPDQAC AHPNWVMGRK ISVDSATMMN KGLEVIEAYW LFGVPVEHLE
VLIHPQSVIH SMVGYDDGSV LAQLGNPDMR TPIAYGLAYP ERIEAGVPLL DLVTTGALTF
EAPDLRRFPC LALAFDALRA GGTAPAALNA ANEVAVEAFL QRRIRFTEIA AVVGDTLART
SIVPADSLDT VFAADAQARQ QAERYIATAC AQLPAA
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