Gene Rpic_1276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1276 
Symbol 
ID6287071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1369768 
End bp1372356 
Gene Length2589 bp 
Protein Length862 aa 
Translation table11 
GC content64% 
IMG OID642624846 
ProductPII uridylyl-transferase 
Protein accessionYP_001898852 
Protein GI187928365 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG2844] UTP:GlnB (protein PII) uridylyltransferase 
TIGRFAM ID[TIGR01693] [Protein-PII] uridylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.111517 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.077343 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCTCTG CTGCCGCCGC TCCTGCCGAA GAAGCCCATC CGCGCGACGC CCTGAAAACT 
GAGCGCGCGC ACCTGTTCGC GCAGTTCGAC CAGCACGCCA ACGTTCAGCA GCTCGTGACC
AAGCTGGCAC GCGCGGTGGA CCGTGCGCTC GTGCGTCTCT GGCAGGAAGA GCAGATGCCC
CCCACCTGCG CGCTGATTGC CGTGGGCGGC TACGGGCGCG GCGAGCTGTT TCCGCATTCC
GATGTGGACA TCCTCCTGTT GCTGCCAGGC ACCGCAGACA AAGCCTTGGA GGCCCGGCTG
GAGGCCTTCA TCGGCCGCTG CTGGGACATG GGGTTGGACA TCGGCTCCTC GGTGCGCACG
GTTGACGAGT GCATCAAGGA AGCCGCACAA GACGTAACAG TACGCACGTC GCTGCTGGAA
GCGCGTCTGC TGACGGGCGA CGAAGGTTTG TACCGCACGT TCGAGACGCA CTATCAAGGC
CATCTGGACG CCGCAGATTT CTTCCAGTCG AAACTGCTGG AGATGCGCCA GAGGCATGCC
AAGTACCAGG ACACGCCGTA TTCGCTCGAG CCGAACTGCA AGGAAAGCCC CGGTGGTCTG
CGCGACCTGC AGGTGATTCT GTGGATGACG CGCGCGGCAG GTTTCGGTTC CAGCTGGAAC
GAGTTGCTTG CCAACGGCCT GCTCACACGC CGTGAAGCAC AGGAACTGGT GAGCAACGAG
CGCCTGCTCA AAACCGTGCG TGCGCGTCTG CACCTGCTGG CCGGGCGTCG TCAGGACGTG
TTGGTGTTCG ACCTGCAGAC GCAGCTGGCC GAATCGTTCG GTTACCGCCC GACCACCGCC
AAGCGCGCGA GCGAACAACT CATGCGCCGC TATTACTGGG TAGCCAAGGC AGTCACACAG
CTCAATACCG TGGTGCTGCA GAACATCGAG GCGCGGCTGT TTCCGAGCGA GCTGGGTATC
ACACGCAAGA TCAACGATCG TTTTGTCGAG CGCCAAGGCA TGCTCGAAAT TGCCGACGCC
GATCTCTACC AGCGCGAGCC GACGGCCATT CTTGAAACGT TCCTGCTGTA CGAGCAGACG
CGCGGCATCA AGGGACTGGC AGCCAGCACG CTGCGGGCGC TCTACAACGC CCGGACGTTG
ATGGACGCCA AATGGCGCAA GGATCCGGCT AATCGCGCGC TGTTCCTGTC GATCCTGCAG
CAGCCGCAGG GCATCACGCA CGCGCTGCGC CTGATGAACC AGACCAGCGT GCTCGGCCGC
TACCTGGTCA ACTTCCGTCG CATCGTCGGG CAGATGCAGC ATGACCTGTT CCACGTCTAC
ACGGTCGATC AGCACATCCT GATGGTGGTG CGCAACATCC GCCGCTTCGC CATCGTCGAG
CACACGCACG AGTTCCCGTT CTGCAGCCAG TTGATGGCGA ACTTCGACAA GCCGTGGGTG
CTGACCGTGG CGGCGCTGTT CCATGACATT GCGAAGGGGC GCGGCGGTGA CCACTCCGTG
CTCGGCATGT CCGACGCACG CCGCTTCTGC AAGGAACACG GCATCGCCAA GGAAGACGCC
GACCTGATCG TCTGGCTGGT CGAACACCAC CTGACCATGA GCCAGGTCGC GCAGAAGCAG
GACCTGGGCG ATCCCGAAGT CATCCGCCAT TTCGCTGATC TGGTCGGTAC CGAACGCCGG
CTGACCGCGC TGTATCTGCT GACCGTTGCC GACATCCGCG GCACCAGCCC AAAGGTGTGG
AACGCCTGGA AGGGCAAGCT GCTGGAAGAC CTGTATCGCA TGACGCTGCG AGTGCTCGGC
GGTGCCACCA CCGACCCGCA CGCCGTGCTC GAAGGCCGCA AGGAAGAAGC GCGCGCGCTG
CTGCGCCTGG CCGCGCTGGA CGACACCGCG CACGAGGCGC TGTGGAAACA GCTCGACGTG
GGCGTGTTCC TGCGCCACGA CGCGCGCGAT ATCGCCTGGT TCACGCGGCA CTTCTACAAC
CGTGTCGACA CGACGATCCC GATCGTGCGC GCACGCATTT CACCGGCGGG CGTGGGCTTG
CAGGTGGCTG TGTACTCGCC GGATCGGCCC GATCTTTTTG CGCGCATCTG CGGCTACTTC
GAACGCAAGA GCCTGACGAT CCTGGACGCC AAGATCCACA CCACCAAACA CGGCTACGCG
CTCGACACCT TCCAGGTGGC CGACCCCAGC AGCGGCCTTG TGGAGCCCGG GCATTACCGC
GACATCATCA CGCTGGTCGA ACACGAACTG GCCGAACAGA TCTCGCGCGA AACCGCCCTG
CCGGAGCCGC CGCGGGGGCG CATCTCGCGC CAGTCGCGCA GCTTCCCGAT CAAACCGCGC
GTCGACCTGC GGGCGGACGA GCGCGGCCAG TATTACCTGC TCTCCATTTC CGCGACCGAC
CGCACCGGTC TGCTCTACGC CATTGCCCGC GTGCTCGCAC ACCGCCGCGT GTCGGTACAC
ACCGCGCGCA TCAACACGCT TGGCGAGCGC GTGGAAGACA TCTTCCTGGT CGACGGCACG
CGCCTGACCC AGGACAACAA ACTGCAGCTC GAACTTGAAA GCGAGCTGCT TGATGCGCTC
GCCATCTGA
 
Protein sequence
MPSAAAAPAE EAHPRDALKT ERAHLFAQFD QHANVQQLVT KLARAVDRAL VRLWQEEQMP 
PTCALIAVGG YGRGELFPHS DVDILLLLPG TADKALEARL EAFIGRCWDM GLDIGSSVRT
VDECIKEAAQ DVTVRTSLLE ARLLTGDEGL YRTFETHYQG HLDAADFFQS KLLEMRQRHA
KYQDTPYSLE PNCKESPGGL RDLQVILWMT RAAGFGSSWN ELLANGLLTR REAQELVSNE
RLLKTVRARL HLLAGRRQDV LVFDLQTQLA ESFGYRPTTA KRASEQLMRR YYWVAKAVTQ
LNTVVLQNIE ARLFPSELGI TRKINDRFVE RQGMLEIADA DLYQREPTAI LETFLLYEQT
RGIKGLAAST LRALYNARTL MDAKWRKDPA NRALFLSILQ QPQGITHALR LMNQTSVLGR
YLVNFRRIVG QMQHDLFHVY TVDQHILMVV RNIRRFAIVE HTHEFPFCSQ LMANFDKPWV
LTVAALFHDI AKGRGGDHSV LGMSDARRFC KEHGIAKEDA DLIVWLVEHH LTMSQVAQKQ
DLGDPEVIRH FADLVGTERR LTALYLLTVA DIRGTSPKVW NAWKGKLLED LYRMTLRVLG
GATTDPHAVL EGRKEEARAL LRLAALDDTA HEALWKQLDV GVFLRHDARD IAWFTRHFYN
RVDTTIPIVR ARISPAGVGL QVAVYSPDRP DLFARICGYF ERKSLTILDA KIHTTKHGYA
LDTFQVADPS SGLVEPGHYR DIITLVEHEL AEQISRETAL PEPPRGRISR QSRSFPIKPR
VDLRADERGQ YYLLSISATD RTGLLYAIAR VLAHRRVSVH TARINTLGER VEDIFLVDGT
RLTQDNKLQL ELESELLDAL AI