| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1267 |
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| Symbol | |
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| ID | 6287364 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1355174 |
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| End bp | 1356373 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624837 |
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| Product | succinyldiaminopimelate transaminase |
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| Protein accession | YP_001898843 |
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| Protein GI | 187928356 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03538] succinyldiaminopimelate transaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.589506 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 0.362674 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCCGC GCCTGTCCGC CCTGCAGCCG TATCCGTTCG AGAAACTGAA AGCGCTTGTG
AAGGACGTCA CGCCCAGCGC CGTCCATACG CCGATCAGCT TCGGGATCGG TGAACCCAAG
CACCCGACGC CGGCCCTGGT GAAAGACGCG CTGACGGCGG CGCTTGGCGG GCTGGCGAAT
TATCCCACGA CGCTCGGTTC CGATGCACTG CGACAGTGCA TCGCTGCATG GCTGGAGCGC
CGCTACGGCT TGCCGAAGGT CGACCCAGCC ACTGAAGTCA TCCCCGTCAA CGGCTCGCGC
GAGGCGCTGT TCTCGTTCGC GCAGACCGTG ATTGACGGCA GCAAGCCCGG CGCCCGCGTG
CTGTGCCCGA ACCCGTTCTA TCAAATCTAC GAAGGCTCGG CGCTGCTGGC CGGCGCCACG
CCGCTGTTCG CCAACAGCGA CCCGGCGCGC AACTACGCGC CCGAGTTTGC CGCGATCACG
CCCGAAGAAT GGCGCAACGT GCAGCTCGTC TTCGTATGCA GCCCGGGCAA CCCGACCGGC
GCCGTGCTCA CGCTCGAAGA CTGGAAGCAG CTCTTCGCGC TGTCGGATGA ATATGGCTTC
ATCATTGCGT CGGACGAGTG CTATTCCGAG ATCTATTTCG ACGAGACCAA CCCGCCGCTG
GGCGCCCTGC AGGCCGCGCA CCAGCTGGGC CGCGGCTTTG ACCGCCTGGT GATGTTCTCG
AGCCTTTCGA AGCGCTCCAA CGTGCCGGGC ATGCGCTCCG GTTTCGTGGC CGGCGACGCC
AAGCTGCTCA AGGCCTATCT GCTGTATCGC ACGTATCACG GCAGCGCGAT GAGCCCGTCG
GTGCAGTCCG CTAGCATCGC TGCGTGGAAT GACGAGACCC ACGTGCGCGA CAACCGCGCG
CAATACGTCA AGAAGTTCCA GCAGGTCACG CCGATGCTGG CCGAGGTGCT GGACGTGGCC
CTGCCCGATG CAGCCTTCTA CCTCTGGGCC AACGTCAAGC GCACGGGCCT GTCGGACACT
GAATTCGCGC GCCAGTTGCT GGCCGCCAAG AACGTCGCCG TGCTGCCCGG AAGCTACCTC
GCCCGCGAGG CGCACGGCAC GAATCCGGGC CAGGACTACG TGCGCATCGC GCTGGTAGCC
GGCGTGGACG AATGCCTGGA AGGCGCCCGC CGCATCGTCG AGTTCTGCCA GCAACGCTGA
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| Protein sequence | MNPRLSALQP YPFEKLKALV KDVTPSAVHT PISFGIGEPK HPTPALVKDA LTAALGGLAN
YPTTLGSDAL RQCIAAWLER RYGLPKVDPA TEVIPVNGSR EALFSFAQTV IDGSKPGARV
LCPNPFYQIY EGSALLAGAT PLFANSDPAR NYAPEFAAIT PEEWRNVQLV FVCSPGNPTG
AVLTLEDWKQ LFALSDEYGF IIASDECYSE IYFDETNPPL GALQAAHQLG RGFDRLVMFS
SLSKRSNVPG MRSGFVAGDA KLLKAYLLYR TYHGSAMSPS VQSASIAAWN DETHVRDNRA
QYVKKFQQVT PMLAEVLDVA LPDAAFYLWA NVKRTGLSDT EFARQLLAAK NVAVLPGSYL
AREAHGTNPG QDYVRIALVA GVDECLEGAR RIVEFCQQR
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