Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1257 |
Symbol | |
ID | 6288496 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1347519 |
End bp | 1348334 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642624827 |
Product | peptidase M55 D-aminopeptidase |
Protein accession | YP_001898833 |
Protein GI | 187928346 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG2362] D-aminopeptidase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.563378 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAATCC TGATTTCCGC CGACATCGAA GGCGTGGCCA ACGTGTTCCA CCCCGAGCAG ACGCGCGCCG GTAACGGCGA ATACGAGCGC GCCCGCCGCT GGATGACCGC CGAAGCCGAC GCCGCCGTCC GCGGTGCCTT CGACGGTGGC GCCACGGACG TGCTCGTTAA CGATTCGCAC GGCGGTTTCC GCAACCTCAT CCCCGATTCC ATCGACCGCC GCGCACGCTT CGTCCTCGGC AAGCCGCGCT ACCTCAGCAT GATGGCCGGC GTGGACGGCT GCGATGCCGT CTGCATGATC GGTTACCACG CGCGCGCCGG CAGCCGCGGC GTGCTGGCGC ACACCATCAA CAGCTTTGCG TTTGCGCGCG TCTGGTTCAA CGAGCAGGAA CTGGGCGAGG CCGGCCTCTA CGGCGCCCTG GCCGGGGAGC GCGGCGTGCC GGTGGCCGTT GCCAGCGGCG ACGACGTGTT CATCAAGGAA ACCAAGCCGC TGCTGCCGCA CACCACCTTT GTCGAGACCA AGCAGGCCGA AGGCCACAAC GCGGGGACAT CGCTCTCGCC CGAGCAGTCG TGCGAGGCCA TCTACGCAGC CGTGAAAGCC ACGGTGCAGC GGGGGCATTT CAGCATGCCG CTGCGCCTCC AGGCGCCGAT CGTATGCCGC CTGCAGACGC AAACGCCCGC ATTGGCCGAC CTGTTCTGCC AATGGCCCGC CCTCGAGCGC GTCGACGGCA CGATGCTGCG CTTCGCCGCC GACTCCGTCG AACATGCCGT GCGCATGCTC AACAGCCTCT CCGCCATGTC CGCGATGCTG CGTTAA
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Protein sequence | MRILISADIE GVANVFHPEQ TRAGNGEYER ARRWMTAEAD AAVRGAFDGG ATDVLVNDSH GGFRNLIPDS IDRRARFVLG KPRYLSMMAG VDGCDAVCMI GYHARAGSRG VLAHTINSFA FARVWFNEQE LGEAGLYGAL AGERGVPVAV ASGDDVFIKE TKPLLPHTTF VETKQAEGHN AGTSLSPEQS CEAIYAAVKA TVQRGHFSMP LRLQAPIVCR LQTQTPALAD LFCQWPALER VDGTMLRFAA DSVEHAVRML NSLSAMSAML R
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