Gene Rpic_1257 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1257 
Symbol 
ID6288496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1347519 
End bp1348334 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content68% 
IMG OID642624827 
Productpeptidase M55 D-aminopeptidase 
Protein accessionYP_001898833 
Protein GI187928346 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2362] D-aminopeptidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.563378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAATCC TGATTTCCGC CGACATCGAA GGCGTGGCCA ACGTGTTCCA CCCCGAGCAG 
ACGCGCGCCG GTAACGGCGA ATACGAGCGC GCCCGCCGCT GGATGACCGC CGAAGCCGAC
GCCGCCGTCC GCGGTGCCTT CGACGGTGGC GCCACGGACG TGCTCGTTAA CGATTCGCAC
GGCGGTTTCC GCAACCTCAT CCCCGATTCC ATCGACCGCC GCGCACGCTT CGTCCTCGGC
AAGCCGCGCT ACCTCAGCAT GATGGCCGGC GTGGACGGCT GCGATGCCGT CTGCATGATC
GGTTACCACG CGCGCGCCGG CAGCCGCGGC GTGCTGGCGC ACACCATCAA CAGCTTTGCG
TTTGCGCGCG TCTGGTTCAA CGAGCAGGAA CTGGGCGAGG CCGGCCTCTA CGGCGCCCTG
GCCGGGGAGC GCGGCGTGCC GGTGGCCGTT GCCAGCGGCG ACGACGTGTT CATCAAGGAA
ACCAAGCCGC TGCTGCCGCA CACCACCTTT GTCGAGACCA AGCAGGCCGA AGGCCACAAC
GCGGGGACAT CGCTCTCGCC CGAGCAGTCG TGCGAGGCCA TCTACGCAGC CGTGAAAGCC
ACGGTGCAGC GGGGGCATTT CAGCATGCCG CTGCGCCTCC AGGCGCCGAT CGTATGCCGC
CTGCAGACGC AAACGCCCGC ATTGGCCGAC CTGTTCTGCC AATGGCCCGC CCTCGAGCGC
GTCGACGGCA CGATGCTGCG CTTCGCCGCC GACTCCGTCG AACATGCCGT GCGCATGCTC
AACAGCCTCT CCGCCATGTC CGCGATGCTG CGTTAA
 
Protein sequence
MRILISADIE GVANVFHPEQ TRAGNGEYER ARRWMTAEAD AAVRGAFDGG ATDVLVNDSH 
GGFRNLIPDS IDRRARFVLG KPRYLSMMAG VDGCDAVCMI GYHARAGSRG VLAHTINSFA
FARVWFNEQE LGEAGLYGAL AGERGVPVAV ASGDDVFIKE TKPLLPHTTF VETKQAEGHN
AGTSLSPEQS CEAIYAAVKA TVQRGHFSMP LRLQAPIVCR LQTQTPALAD LFCQWPALER
VDGTMLRFAA DSVEHAVRML NSLSAMSAML R