| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1253 |
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| Symbol | |
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| ID | 6289447 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1343018 |
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| End bp | 1344571 |
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| Gene Length | 1554 bp |
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| Protein Length | 517 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642624823 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001898829 |
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| Protein GI | 187928342 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.245274 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.49371 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAATC GCTTTGCTTT CAGCCCGCGC GCAGCCATGG TTGCCAGCGG CCTGGCCCTG
GCGGCATTCA CCATGCCGGC CTTTGCCGCC AAGGACGCCG TGATGGCGGT CTACTCGACC
TTCACCACGA TGGACCCGTA CGACGCCAAC GACACGCTGT CGTTCAGCGC GGCCAAGTCG
TTCTATCAAG GCCTGTTCGG CTTCGACAAG GACATGAAGC TGGTCAACGT GCTGTGCGAC
AGCTACGAGG TCAGCAAGGA CGGCCTCGTC TACACGTTCA AGCTGAAGAA GGGCGTGAAG
TTCCACGATG GCACCACGTT TGATGCCAAC GCCGTCAAGG CCAACCTGGA CCGCGTGACC
GACCCGGCCA ACAAGCTCAA GCGTTTCGTG CTGTTCAACC GCGTGGCCAA GACCGAAGTT
GTTGACCCGA CCACCGCCCG CGTGACGCTC AAGGAGCCGT TCTCGCCGTT CATCAACGTG
CTGGCCCATC CGTCGGCGGC GATGATCTCG CCCACGGCGC TCAAGAAGTA CGGCAAGGAC
ATCGCGTTCC ACCCGGTCGG CACCGGGCCG TTCGAATTTG TCGAGTGGAA GCAGACCGAC
TACCTGAAGG GCAAGAAATT CGACGGCTAC TGGAAACACG GCCTGCCGAA GATCGACACC
ATCACCTGGA AGCCGGTGGT CGACAACAAC ACGCGCGCCA CCATCATGCA GACGGGCGAG
GCCGACTTTG CGTTCACGAT TCCGTTCGAG CAGGCTGCCG TCCTCAAGAG CAGCCCCAAG
GTTGACCTGA TTGCCGCGCC GTCGATCATC CAGCGCTATG TCAGCTTCAA CACCAACGTG
AAGCCGTTCG ACAACCCCAA GGTGCGTCAG GCGATCAACT ATGCGATCAA CAAGGATGCG
CTGACCAAGG TGGCGTTCGC GGGTTACGCC GTGCCGGCCG AAGGCGTGGT GCCGCCGGGC
GTTGACTACG CGGTCAAGCT GGGCCCGTGG CCGTACAACC CGGCCAAGGC GAAAGAGCTG
CTGAAGGAAG CGGGTTACCC GAACGGCTTT GAGACGCAAC TGTGGTCGGC CTATAACCAC
ACGACGGCGC AGAAGATCAT CCAGTTCGTG CAGCAGCAAC TGGCCCAGGT CGGCATCAAG
ACGTCGGTGC TGGCGCTGGA AGCCGGCCAG CGCGTCGAGC GTGTGGAAAG CGTGCCCAAG
CCGGAAGACG CCGGCGTGCG CATGTATTAC GCAGGCTGGT CGTCGTCGAC GGGTGAGTCG
GATTGGGCGC TGCGTCCGTT GCTGGCATCG GAAGCCATGC CGCCCAAGTC GTTCAACACC
GCATACTACA AGAACGAGCA GGTGGATGCC GACATCGCGG GCGCACTGCG CACGACCGAT
CGCGCTGAGA AGTCGAAGCT CTACACCGAC GCGCAGAAGC GCATCTGGGA AGACGCACCG
TGGGCCTTCC TGGTGACGGA GAAGATCGTC TACGCGCGCT CGAAGCGTCT GTCGGGTGCC
TACGTCGCGC CGGACGGTTC GTTCAGCTTC GACGACATCG ACGTCAAGCA ATAA
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| Protein sequence | MFNRFAFSPR AAMVASGLAL AAFTMPAFAA KDAVMAVYST FTTMDPYDAN DTLSFSAAKS
FYQGLFGFDK DMKLVNVLCD SYEVSKDGLV YTFKLKKGVK FHDGTTFDAN AVKANLDRVT
DPANKLKRFV LFNRVAKTEV VDPTTARVTL KEPFSPFINV LAHPSAAMIS PTALKKYGKD
IAFHPVGTGP FEFVEWKQTD YLKGKKFDGY WKHGLPKIDT ITWKPVVDNN TRATIMQTGE
ADFAFTIPFE QAAVLKSSPK VDLIAAPSII QRYVSFNTNV KPFDNPKVRQ AINYAINKDA
LTKVAFAGYA VPAEGVVPPG VDYAVKLGPW PYNPAKAKEL LKEAGYPNGF ETQLWSAYNH
TTAQKIIQFV QQQLAQVGIK TSVLALEAGQ RVERVESVPK PEDAGVRMYY AGWSSSTGES
DWALRPLLAS EAMPPKSFNT AYYKNEQVDA DIAGALRTTD RAEKSKLYTD AQKRIWEDAP
WAFLVTEKIV YARSKRLSGA YVAPDGSFSF DDIDVKQ
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