Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1242 |
Symbol | |
ID | 6289335 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1329289 |
End bp | 1330083 |
Gene Length | 795 bp |
Protein Length | 264 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642624812 |
Product | phage SPO1 DNA polymerase-related protein |
Protein accession | YP_001898818 |
Protein GI | 187928331 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1573] Uracil-DNA glycosylase |
TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.738609 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGTC GATCCCGAAT GCTCGAAGCG CTGGGCGTTT CGACCGAATG GACCTTGCGC GGGGCTGAGC CGGCCGGGTT GGAGGCCGTC GAGGTCGCCG CCGCCGAGCC GGTTGCCGTA GAGGTGGAAG CCGATTCGTT TGTTGCGGCC GAGTCCGTGC CCGTGCGAGG TGAACCGCCT GTCATGCACG CGTTATCGGA CACGGCTGCA CCACGCGCCC AGCGCATCGC CGCGTTCGAC TGGGCGCAGC TCGAAGCTGC CGTTTCCAAC TGCACATCGT GCAAGCTCTG CGAGCGTCGC ACGAACACCG TTTTCGGCGT TGGCGATCGC GAGGCGGAAT GGATGCTGAT CGGCGAGGCG CCGGGTGAGC AGGAAGACAA GCAGGGCGAG CCGTTTGTCG GCCAGGCCGG CAAGCTGCTC GACAGCATGC TGCGATCGAT CGGCTTGTCG CGCGAGAAGG GCGTGTTCAT CGCCAACGTG CTCAAGTGCC GCCCGCCCGG CAATCGGGAC CCGGAGCCGG ACGAAGCAGC GATGTGCGAT CCGTATCTCA AGCGTCAGAT TGCGCTGGTC AAGCCGCGCA TCATCGTCGT GCTAGGCCGC GTTGCCGCGC AGAACCTGCT GCAGACGCAG ACGCCTGTCG GCAAGCTGCG CGGCACGGTG CATGACGTGG AAGGCGTGCC CGTGGTGGTG ACCTATCACC CGGCCTACCT GCTGCGTACG CTGACCGACA AGGCGCGTGC CTGGGAAGAC CTCTGCCTGG CGCGTAAGAT CTACGCGGAG CGCGGCGGCC AGTAG
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Protein sequence | MNRRSRMLEA LGVSTEWTLR GAEPAGLEAV EVAAAEPVAV EVEADSFVAA ESVPVRGEPP VMHALSDTAA PRAQRIAAFD WAQLEAAVSN CTSCKLCERR TNTVFGVGDR EAEWMLIGEA PGEQEDKQGE PFVGQAGKLL DSMLRSIGLS REKGVFIANV LKCRPPGNRD PEPDEAAMCD PYLKRQIALV KPRIIVVLGR VAAQNLLQTQ TPVGKLRGTV HDVEGVPVVV TYHPAYLLRT LTDKARAWED LCLARKIYAE RGGQ
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