| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1213 |
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| Symbol | |
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| ID | 6287652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1302524 |
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| End bp | 1303516 |
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| Gene Length | 993 bp |
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| Protein Length | 330 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624783 |
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| Product | aliphatic sulfonates family ABC transporter, periplsmic ligand-binding protein |
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| Protein accession | YP_001898789 |
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| Protein GI | 187928302 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
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| TIGRFAM ID | [TIGR01728] ABC transporter, substrate-binding protein, aliphatic sulfonates family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.63943 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0779306 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCC ACTCGCCCCT GCGCAGGACT TTGACCATTG CCGCCACGTT GCTTGCAACG
CTTGGCGTGC CCGCCGCATT TGCCAATAGC GATGCGCCGC CCCCGACCGC AGCCAAACAA
CTGCGCATCG GCTATCAGAA ATACGGCACG CTGACGGTGC TCAAGGCACG CGGCACGTTG
GAAAAGCGCC TTGCCGCTCA GGGCATCGAA GTGAAGTGGA CCGAGTTTCC GGCAGGCCCG
CAGTTGCTGG AAGGCCTGAA CGTGGGCGCC ATCGATTTCG GCACCACGGG TGAAGCACCG
ACAATCTTCG CGCTGGCTGC CGGGGCGCAC CTCGTCTATG TCGGCAACCA GCCGCCCGCG
CCGGCCGGCG AGGCGATCAT CGTGCCGAAG ACGTCGCCGC TCAAGAGCGT GGCCGATCTC
AAGGGCAAGC GCGTTGCCTT CAACAAGGGC TCGAACGTGC ATTACCTGCT GGTGAAGCTG
CTGGAAAAGG CCAATGTGCC CTACAGCGAT ATCCAGCCCG TATACCTGAC CCCCGCCGAT
GCGCGTGCCG CCTTCGAGCG CGGCGCCATC GACGCCTGGG TGATCTGGGA TCCGTTCTTT
GCCGCGGCCG AACAGCAGCT GGGCGCGCGC GTGCTGGCCG ATGGCACGGG CGTGGTCAAC
AACTCGCAGT ACTTCCTGGC ATCGAAGGGC TATGCAGGCG CGCGGCCCGA TGTGCTGAAC
ATCGTGCTCG ATGAGCTGAA GAAGACCGAC ACCTGGGCCG CTGCCAACCC GAAGGATGTG
ACAAACATTC TTGGCCCGCA GCTCGGCCTG GAGCCGGCCG TGGTGGCGCG TTCGGTGTCG
CGCATTGCCT ATGGCATCCA GCCCGTCGGG CCCGAGGCCC TGGCTGACCA GCAGCGCATT
GCCGATACGT TCCACACGCT CAAGCTGATC CCGCGCCCCG TCAAGGTGGC CGACTCTGCG
TGGCAGCCGA CGACGCAGCA AGCCGCGCGC TGA
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| Protein sequence | MKTHSPLRRT LTIAATLLAT LGVPAAFANS DAPPPTAAKQ LRIGYQKYGT LTVLKARGTL
EKRLAAQGIE VKWTEFPAGP QLLEGLNVGA IDFGTTGEAP TIFALAAGAH LVYVGNQPPA
PAGEAIIVPK TSPLKSVADL KGKRVAFNKG SNVHYLLVKL LEKANVPYSD IQPVYLTPAD
ARAAFERGAI DAWVIWDPFF AAAEQQLGAR VLADGTGVVN NSQYFLASKG YAGARPDVLN
IVLDELKKTD TWAAANPKDV TNILGPQLGL EPAVVARSVS RIAYGIQPVG PEALADQQRI
ADTFHTLKLI PRPVKVADSA WQPTTQQAAR
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