| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1172 |
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| Symbol | |
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| ID | 6289608 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1261874 |
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| End bp | 1262650 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 642624741 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_001898748 |
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| Protein GI | 187928261 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.459391 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTCAGA TCCATAACGC AAGCCAACCA TCGGCACCCA ACAAGCGCTG CTCCGGATGC
AACTCCGATG ATGGCACCGC TATCGAGATG GCCTTCGCAT TTCAGCCGAT CGTTGATCTG
CGCACGGGCG ACGCCTACGC ACACGAAGCG CTCGTACGCG GACCCAACGG AGAGCCTGCG
GCATCGGTGC TGACGCAAGT GGACGAGGCA AACCGTTACC GGTTTGACCA ACGGTGCCGC
ACCACCGCAA TTGAGCAGGC GGCCGGGATA GGGATGGACA CCTTTCTATC CATCAATTTC
ATGCCGAATG CGGTGTATCA GCCTGCCGCA TGTATCCGCA CAACGTTTGA AGCGGCCGAA
AAATTCGGCT TTCCCATCAA TCGGATCATC TTCGAAACCA TCGAGGGCGA AGACATCATC
AACCGCCCCC ACCTCCTGGA GATCTTTCGG GCATATCAAT CGTTCGGCTT CCAAACCGCG
ATTGATGATT TCGGTGCCGG CCACTCCGGG CTCACCCTAC TCGCCGATTT CCAGCCGGAC
CTGATCAAGT TGGATATGGC ACTTATCCGA GGAATCGATT CAGATCTGGT GCGTCAACGC
ATTGTTTGCG GTGTGCTCAG CATCTGCAAC GACCTCGGGA TCCGGGTCAT TGCCGAAGGT
GTTGAAACGG CACCGGAACG CGACTTCCTC GCTGCCGCGG GTATCACGCT CATGCAAGGC
TATCTGTTCG CAAAGCCTAC GTTCAGAGCA ATGCCACCGG TATCAAACAC TCGCTGA
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| Protein sequence | MIQIHNASQP SAPNKRCSGC NSDDGTAIEM AFAFQPIVDL RTGDAYAHEA LVRGPNGEPA
ASVLTQVDEA NRYRFDQRCR TTAIEQAAGI GMDTFLSINF MPNAVYQPAA CIRTTFEAAE
KFGFPINRII FETIEGEDII NRPHLLEIFR AYQSFGFQTA IDDFGAGHSG LTLLADFQPD
LIKLDMALIR GIDSDLVRQR IVCGVLSICN DLGIRVIAEG VETAPERDFL AAAGITLMQG
YLFAKPTFRA MPPVSNTR
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