Gene Rpic_1164 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1164 
Symbol 
ID6286926 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1252908 
End bp1254332 
Gene Length1425 bp 
Protein Length474 aa 
Translation table11 
GC content61% 
IMG OID642624734 
Productmannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 
Protein accessionYP_001898741 
Protein GI187928254 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0662] Mannose-6-phosphate isomerase
[COG0836] Mannose-1-phosphate guanylyltransferase 
TIGRFAM ID[TIGR01479] mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.703913 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATATTT ACCCCGTCAT TCTGTGTGGC GGAAGCGGTA CCCGTCTCTG GCCAATGTCG 
CGCGGCGGCT ATCCGAAACA GTATCTGAAG CTCGTCGGCG AACACACGCT GGTGCAACAG
ACGGCGCTGC GCCTGCGCGG TATCGGCAAT GTGGCCGCCC CGATCGTGAT CACCAATGAG
GAGCAGCGCT TTCTGGTGGC CGAGCAACTG CGCAGCGTCG ACGTGAAACC GTCGGCAATC
GTGCTTGAGC CGGTCGGCCG CGATACGGCG CCAGCCGTAG CCGTGGCGGC CCTGCTTGCA
TCGCAGGCAA CGCCCGATGC GCTGCTGCTG GTACTGCCGT CGGATCACGT GATCGAGGAC
GACGTGGTGT TCGGCAAGCT CGCCACGGTT GCAGCCAGTG TCGCCAAGGA TAACTTCTTG
GTCACTTTTG GCATCGAGCC CACCGAGCCG CATACGGGTT ACGGCTACAT CCGCGGTGGC
GAAGCGCTGG TTGCAGTCGA TGGCACGTAC CGGGTGGAGC GTTTTGTGGA AAAGCCGGAC
GCGGTGACCG CCGCCCGCTT GCTGGAAGAG GGTGGGTACT ACTGGAACAG CGGCATGTTC
ATGCTGAAGG CGGCCGCTTA CCTGGACGAA CTCCGCCAGC ATGCGCCCGA GATTCTCCGT
CAAGCAGAAC TGGCACTGAA CGCCGCCAAG CGCGACGCTG ATTTCGTGCG GCTCGATGCA
GAGGCCTTCG GCGCCAGCCC CAAGCTGTCG ATCGACTACG CCGTCATGGA AAAAACGGCA
CATGCTGCCG TTGTGACGGC GGCTGGCCTG GGCTGGAACG ACATCGGTTC GTGGACGGCT
CTTGCCGAGA TCGCCAACGT CGACGACAAC GGCAATGCGT TGTTTGGGGA CGTGCTGGTC
GAGGACGCGA GGAACACATA CGTGCGGGCC GAGCACCGCA TGGTGGCGGC GGTGGGCGTC
AACGACCTGG TGATTGTGGA AACCGCCGAT GCGATTCTGG TGTCGCACCG TGACAGAGCG
CAGGACGTCA AGAAGATCGT CGAGCGTCTG AACAGCTCGG GCCGTCACGA GTCGGTCACG
CACCGCAAGG TGTTTCGCCC TTGGGGTTCA TATGAGGGCA TTGACCAAGG CGAGCGCTTC
CAGGTCAAGC GCATCATCGT CAATCCGGGC TCGTCGCTCA GTCTGCAAAT GCATCACCAT
CGTGCAGAAC ATTGGATCGT GGTGTGCGGC ACCGCCAAGG TATTCAACGG TGATCAGGTG
ATGCTGCTGT CGGAAAACCA GTCAACGTAT ATACCGCTAG GCGTGACGCA TCGCCTGGAA
AACCCGGGCA AGATTCCGCT TGAGCTGATT GAAGTGCAAT CCGGATCCTA CCTTGGCGAG
GACGATATTG TTCGCTTCCA GGATCACTAC GGGCGCGTTG CTTAG
 
Protein sequence
MNIYPVILCG GSGTRLWPMS RGGYPKQYLK LVGEHTLVQQ TALRLRGIGN VAAPIVITNE 
EQRFLVAEQL RSVDVKPSAI VLEPVGRDTA PAVAVAALLA SQATPDALLL VLPSDHVIED
DVVFGKLATV AASVAKDNFL VTFGIEPTEP HTGYGYIRGG EALVAVDGTY RVERFVEKPD
AVTAARLLEE GGYYWNSGMF MLKAAAYLDE LRQHAPEILR QAELALNAAK RDADFVRLDA
EAFGASPKLS IDYAVMEKTA HAAVVTAAGL GWNDIGSWTA LAEIANVDDN GNALFGDVLV
EDARNTYVRA EHRMVAAVGV NDLVIVETAD AILVSHRDRA QDVKKIVERL NSSGRHESVT
HRKVFRPWGS YEGIDQGERF QVKRIIVNPG SSLSLQMHHH RAEHWIVVCG TAKVFNGDQV
MLLSENQSTY IPLGVTHRLE NPGKIPLELI EVQSGSYLGE DDIVRFQDHY GRVA