Gene Rpic_1156 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1156 
Symbol 
ID6288755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1238055 
End bp1239170 
Gene Length1116 bp 
Protein Length371 aa 
Translation table11 
GC content65% 
IMG OID642624726 
Productglycosyl transferase group 1 
Protein accessionYP_001898733 
Protein GI187928246 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0438] Glycosyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.242648 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCTGA TCCTTGCGGT GGATGCGATC GTGCCACCAT TGACGGGCAT CGGCCGCTAC 
ACGTGGGAAC TGGCCAGGCA CTACACCCTG CCGCAAATCG GACTGGACCA AGCGCGCTTC
TTCTTTGCCG GCCGCTGGGT GGAGGATCCT GCCTCGCTGC TACAGCCTGC CACAGCGCAG
CCGCGTCGGC GCAAGGGCTT GCTGCCCCGC ATGCCTGCCA GTTGGCGCCG CTGGAACATG
CGGCGCCAAA TGCGAAGCCA TGTATTTCAT TCGCCAAACT ATTTCCTTCC CGATGCGGTG
GATGGCGGCA TCGTCACGGT GCACGACCTG TCCGTATTCA AGTACCCCGA GACCCATCCG
GCGGAGCGCT TGCGGCATTT CGAGCAAGGC TTTGCTTCCA CACTGAAGCG GGCTGCACAT
CTGATCACCG ATTCCGAGGC GGTTCGTGCA GAGGTGGTGG AATACTTTGG CTGGCCGCGT
GACAAGGTCA CCGCAATCAG GCTTGGGGTG CCGACCGAAT TCGGGCCGCG TCCGCACGCA
GAACTGCGTG CGGCGCTAGA GCAGTATGGC CTGGCGCCGG GAGCCTATGC GCTTTGCGTC
TCAACACTGG AGCCGCGCAA GCGCGTCGAC CGCCTGCTCA CTGCCTACGG CACCCTGCCC
TCGGCATTGC GCGAGAGCTG TCCGCTTGTG CTGGCAGGCA GCAAGGGCTG GCTGAGCGAC
GGTTTGCAGG AGCAGATTGC GCGCGGCCAG AGCGAGGGAT GGCTGCACTA CCTGGGCTTC
GTGCCCGAGC CCGTCCTTCC CTTGCTGTAC GCTGGTGCGC GGGCCTTCCT GTACCCTTCG
GTGTATGAAG GCTTCGGCCT TCCCGTATTG GAAGCCCTTG CCAGTGGCGT ACCGACGCTG
ACGTCCGATT GCTCGTCGCT GCCGGAGGTC GCCGACGGCG CCGCTTGGTT GGTGCAGCCG
GATGATCACG CCGCGCTGTG TGAAGGGATC GCCAAGGTCT TGTCCGACGA AGCATGGCGC
GCGCAGGCAG TGGAACGCGG ACTGCAAGTG GCCCAGCAGC ACAGTTGGGC CCGCTGTGCG
GCGGGTACGC TGGAGGTGTG CCGGCAGTTC GCGTGA
 
Protein sequence
MKLILAVDAI VPPLTGIGRY TWELARHYTL PQIGLDQARF FFAGRWVEDP ASLLQPATAQ 
PRRRKGLLPR MPASWRRWNM RRQMRSHVFH SPNYFLPDAV DGGIVTVHDL SVFKYPETHP
AERLRHFEQG FASTLKRAAH LITDSEAVRA EVVEYFGWPR DKVTAIRLGV PTEFGPRPHA
ELRAALEQYG LAPGAYALCV STLEPRKRVD RLLTAYGTLP SALRESCPLV LAGSKGWLSD
GLQEQIARGQ SEGWLHYLGF VPEPVLPLLY AGARAFLYPS VYEGFGLPVL EALASGVPTL
TSDCSSLPEV ADGAAWLVQP DDHAALCEGI AKVLSDEAWR AQAVERGLQV AQQHSWARCA
AGTLEVCRQF A