Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1119 |
Symbol | truB |
ID | 6286981 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1195652 |
End bp | 1196608 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642624692 |
Product | tRNA pseudouridine synthase B |
Protein accession | YP_001898699 |
Protein GI | 187928212 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0130] Pseudouridine synthase |
TIGRFAM ID | [TIGR00431] tRNA pseudouridine 55 synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.717594 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 0.307912 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGAGC ACCAAGTGCC CAGGCCCCAA AAGCCGCCGC GGCGTGATGT GCATGGCGTG CTGCTCCTAG ACAAGCCGAT CGGCTGGTCG AGCAACGATG CGCTGATCCG CGCCAAACGC CTGCTGTGGG CCAAGAAGGC GGGGCATACC GGCACGCTCG ATCCGCTTGC TACGGGACTG TTGCCCCTGT GTTTTGGCGA GGCGACCAAG TTTTCGCAGG ATCTGCTCGA TGCGGACAAG ACGTACGAAA CCGTCGTGCG CCTTGGGATC AGGACGAGTA CCGCAGACGC GGAAGGCGAG GTGCTGAGCG AGCGCCCGGT ATCGGTCACG CCCGAGCAAC TGCAGGCAGC CATCGCGCGC TTCGTCGGCG AGATCGACCA GGTGCCGCCG ATGCACTCGG CGCTGAAGAA GGACGGCAAG CCGCTGTACG AGTACGCCCG TGCGGGGCAA ACGGTGGAAC GTGCTGCGCG TCGGGTAACG ATCTACGCGA TTGATGTGCT GGCAACCGAC CTGCAATCGG CCGAACCAAC GGTCACGTTG CGCGTGTCAT GCAGTAAAGG AACATACATC CGCACGTTGG GTGAAGACAT TGGGGAGGCG CTGGGCTGCG GAGGGCATCT GGTTGCGCTG CGTCGCACCC AGGTGGGCAA CCTCACGCTG GACGGCGCCG TGACACTCGA AGCGTTGGAC GCTGCTGCTG AAGATGCACG TGGTGCATTG CTGGCGCCGG TCGATGCGCT GTTGCAGACG CTGCCGCGCG TTGAGCTGGA TGCGCAAGAG AGCCGTCGCT TCCTGCATGG CCAGCGCTTG CCGTTGCAAT TGGCGTTGCC GAATGCAGAC CAGGTGCGCG TCTACGGCGT GCGTGACGCG ATCGCGGCGG ATGCCACTGC GTCGCTGCTC GGAGTGGCTG CCTGGCAAGG CGGTGTGCTC CGGCCGGAGC GGCTCGTGCA TCTTTAA
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Protein sequence | MAEHQVPRPQ KPPRRDVHGV LLLDKPIGWS SNDALIRAKR LLWAKKAGHT GTLDPLATGL LPLCFGEATK FSQDLLDADK TYETVVRLGI RTSTADAEGE VLSERPVSVT PEQLQAAIAR FVGEIDQVPP MHSALKKDGK PLYEYARAGQ TVERAARRVT IYAIDVLATD LQSAEPTVTL RVSCSKGTYI RTLGEDIGEA LGCGGHLVAL RRTQVGNLTL DGAVTLEALD AAAEDARGAL LAPVDALLQT LPRVELDAQE SRRFLHGQRL PLQLALPNAD QVRVYGVRDA IAADATASLL GVAAWQGGVL RPERLVHL
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