| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1104 |
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| Symbol | |
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| ID | 6287109 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 1179914 |
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| End bp | 1181371 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642624677 |
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| Product | cbb3-type cytochrome c oxidase subunit I |
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| Protein accession | YP_001898684 |
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| Protein GI | 187928197 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0460465 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.978944 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAATCAT CCAGCGCGTT GCAGCACACC CAGACCTTCA ACTATCGCGT GGTACGCCAG
TTCTCGATCA TGACGATCGT CTGGGGCATC GTCGGTATGG CGGTCGGTGC GCTGATCGCG
GCCCAGTTGA TCTGGCCGCA ACTGAATTTC GGGGTGCCCT GGCTGTCCTA CGGCCGGCTG
CGTCCTCTGC ACACGAATGC CGTCATCTTT GCGTTTGGCG GCAGCGCGCT GTTTGCGACG
TCCTACTACA TCGTGCAGCG TACCTGCCAG GTGCGCCTGC TTTCCGACAA GCTTGCCGCC
TTCACGTTCT GGGGCTGGCA GGCAGTGATC GTGGCTGCCG CCATCACCCT GCCGCTGGGC
TACACAAGCT CGAAGGAATA CGCTGAGCTG GAATGGCCGA TCGACATCCT GATCACCGTG
GTGTGGGTGG TCTACGCGAT CGTCTTCTTC GGCACCATCA TCAAGCGCAA GACCCGGCAC
ATCTACGTGG CCAACTGGTT CTTCGGCGCT TACATCATCA CGATCGCGCT GCTGCATATC
GTCAACAACG CTGAGTTGCC CGTGTCGATG TGGAAGTCGT ACTCGGCTTA TGCCGGCGTG
CAGGATGCGA TGGTGCAATG GTGGTATGGG CACAACGCTG TGGGCTTCTT CCTGACCACC
AGCTTCCTGG GCATGATGTA TTACTTCGTG CCGAAGCAGG CCGAGCGCCC GATCTATTCG
TATCGCCTGT CGATCGTGCA CTTCTGGGCG CTGAACTTCA CCTACATGTG GGCGGGTCCG
CACCACCTGC AGTACACGGC GCTGCCCGAC TGGGCCCAGT CGCTCGGCAT GGTGTTTTCG
CTGATCCTGC TGGCGCCGTC GTGGGGCGGC ATGATCAACG GGATCATGAC CCTGTCGGGT
GCCTGGCACA AGCTGCGCAC CGATCCGATC CTGAAGTTCC TGGTCGTGGC GCTGTCGTTC
TATGGCATGG CGACGTTCGA GGGCTCGATG ATGTCCATCA AGACCGTGAA TGCGCTGTCG
CACTACACCG ACTGGACAAT CGGCCACGTG CACTCCGGCG CCCTGGGCTG GGTGGCGATG
ATCACTATCG GTTCGATGTA CTACATGATC CCGCGCCTGT TCGGCCAGCA GAAGATGTAC
AGCACGCGCC TGATCGAGGT GCACTTCTGG GTGGCGACCA TCGGCGTTGT CCTCTATATC
GCCGCCATGT GGGTCGCCGG CGTGATGCAG GGCCTGATGT GGCGCGCCAC CGAGGCTGAC
GGCACGCTGA CCTACAGCTT TGTCGAGGCG GTCAAGGCAA CGTACCCGTT CTACCTGATT
CGCTTGGCTG GTGGCCTGTG CTTCCTGGGC GGCATGCTGC TGATGGCATT CAACGTGTTC
AAGACCATCC AGGGCAGCAA GGCGATCGAT GCACCGATTC CTCAATCGGC CCAGACCCCG
ATGGTCGCGG CTCAGTGA
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| Protein sequence | MESSSALQHT QTFNYRVVRQ FSIMTIVWGI VGMAVGALIA AQLIWPQLNF GVPWLSYGRL
RPLHTNAVIF AFGGSALFAT SYYIVQRTCQ VRLLSDKLAA FTFWGWQAVI VAAAITLPLG
YTSSKEYAEL EWPIDILITV VWVVYAIVFF GTIIKRKTRH IYVANWFFGA YIITIALLHI
VNNAELPVSM WKSYSAYAGV QDAMVQWWYG HNAVGFFLTT SFLGMMYYFV PKQAERPIYS
YRLSIVHFWA LNFTYMWAGP HHLQYTALPD WAQSLGMVFS LILLAPSWGG MINGIMTLSG
AWHKLRTDPI LKFLVVALSF YGMATFEGSM MSIKTVNALS HYTDWTIGHV HSGALGWVAM
ITIGSMYYMI PRLFGQQKMY STRLIEVHFW VATIGVVLYI AAMWVAGVMQ GLMWRATEAD
GTLTYSFVEA VKATYPFYLI RLAGGLCFLG GMLLMAFNVF KTIQGSKAID APIPQSAQTP
MVAAQ
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