Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_1073 |
Symbol | |
ID | 6286393 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1142230 |
End bp | 1142982 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642624646 |
Product | RNA methyltransferase, TrmH family, group 3 |
Protein accession | YP_001898653 |
Protein GI | 187928166 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0566] rRNA methylases |
TIGRFAM ID | [TIGR00186] rRNA methylase, putative, group 3 |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.5513 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 43 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTAAAT CCAAGCTCCT CATCGGCTTT CATGCCGTCA CCGCCCGACT GCGCCACGGC GCCAAGTCGA TCGACGAAAT CTACTTCGAG GCCAACCGCC GCGACCGCCG CATGCAGGAT TTCCTGAAAG CGGCGGAAGC AGCGGGCGTG CGCCTCATTC CCGCTGACGC CGACCGTCTG CGCGGCATTG CCGGTACCGA CCGCCACCAG GGCGTGGTTG CCAAGGCAGA GTCGCTGTCG TTGGCGCTCA ATCTTGATGA ACTGCTCGAC GGCATCGAAG GCACGCCGCT GCTGCTGGTG CTCGACGGTG TGACGGACCC GCACAACCTC GGCGCTTGCC TGCGCGTGGC CGATGCTGCC GGCGCGCATG CCGTGATCGC GCCGAAGGAC CGCAGCGTTG GGATCAACAC GACGGTCGCC AAGGTCGCCA GCGGCGCGGC TGAAACCGTC CCGTATATCA CCGTGACCAA CCTGGCGCGC ACGCTGCGTG AATTGCAGGA GCGCGGCGTG TGGGTGATCG GCACGGCTGA CGAGGCCGAA CAGGATCTCT ACCAGGCAGA CTTCAAGGGC CCCACCGCCA TCGTGATGGG CGCCGAAGGC GAAGGCATGC GCCGCCTCAC GCGTGAAACG TGCGACGCGC TGGTCAGCAT TCCGATGGCC GGCAGCGTTG AAAGCCTGAA CGTGTCGGTA GCCAGCGGGG TTTGCCTGTT TGAGGCTGTG CGCCAACGCG CAGCGGCACC TGCCAGGAAG TAA
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Protein sequence | MSKSKLLIGF HAVTARLRHG AKSIDEIYFE ANRRDRRMQD FLKAAEAAGV RLIPADADRL RGIAGTDRHQ GVVAKAESLS LALNLDELLD GIEGTPLLLV LDGVTDPHNL GACLRVADAA GAHAVIAPKD RSVGINTTVA KVASGAAETV PYITVTNLAR TLRELQERGV WVIGTADEAE QDLYQADFKG PTAIVMGAEG EGMRRLTRET CDALVSIPMA GSVESLNVSV ASGVCLFEAV RQRAAAPARK
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