Gene Rpic_1038 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1038 
SymbolrecR 
ID6287157 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1103894 
End bp1104514 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content64% 
IMG OID642624610 
Productrecombination protein RecR 
Protein accessionYP_001898618 
Protein GI187928131 
COG category[L] Replication, recombination and repair 
COG ID[COG0353] Recombinational DNA repair protein (RecF pathway) 
TIGRFAM ID[TIGR00615] recombination protein RecR 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.466344 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.413598 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAACG CTCCAGGCAC GCCGTCGGCG CTGCAGATGC TGGTTGAAGC CTTGCGCGTG 
CTGCCGGGCG TGGGCCCCAA GTCTGCCCAG AGGATGGCGT ATCACCTGAT GCAGCATGAC
CGCGAGGGGG CGGCGCAGCT GGCACAGGCG CTGTCTGAGG CAACGGAATC GATCCAGCAC
TGCAGCCGCT GCAATACCTT TACCGAGCAG GAAGTTTGCG AGACCTGCTT GGACACGCGC
CGCGATGCAT CGGTCCTGTG CGTGGTGGAA ACGCCCGCTG ATCAGATGAT GATCGAGCAG
ACGCTGACCT ATCGCGGCCA ATACTTCGTG CTGATGGGGC GGCTCTCGCC GCTGGACAAC
ATCGGCCCGA AAGAGATCCA CCTCGAACGC TTGCTGGCCC GTGCGACCGA TCCTGCGCTG
GGCGGGCCGT GCACCGAGGT CATCCTCGCA ACCAACTTCA CCAGCGAAGG TGAGGCGACA
GCCCATTACA TTGGCGAGAT GTTGAAGGCG CGCGGCATCA AGGCGACGCG TCTTGCGCGT
GGCGTGCCGG TAGGCGGTGA GCTGGAATAC GTGGACGCGG GTACCATCGC TCGCGCCGTG
CTGGACCGGC GCCAACTCTG A
 
Protein sequence
MRNAPGTPSA LQMLVEALRV LPGVGPKSAQ RMAYHLMQHD REGAAQLAQA LSEATESIQH 
CSRCNTFTEQ EVCETCLDTR RDASVLCVVE TPADQMMIEQ TLTYRGQYFV LMGRLSPLDN
IGPKEIHLER LLARATDPAL GGPCTEVILA TNFTSEGEAT AHYIGEMLKA RGIKATRLAR
GVPVGGELEY VDAGTIARAV LDRRQL