Gene Rpic_1035 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1035 
Symbol 
ID6289208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1100943 
End bp1103138 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content68% 
IMG OID642624607 
ProductDNA polymerase III subunits gamma and tau 
Protein accessionYP_001898615 
Protein GI187928128 
COG category[L] Replication, recombination and repair 
COG ID[COG2812] DNA polymerase III, gamma/tau subunits 
TIGRFAM ID[TIGR02397] DNA polymerase III, subunit gamma and tau 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.430627 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.544075 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTATC AAGTGCTCGC CCGCAAGTGG CGCCCTCGCG ATTTCACCAC GCTGGTCGGT 
CAGGAACACG TGGTGAAAGC GCTCACGCAT GCGCTCGAAC AGCAGCGCCT GCACCACGCA
TACCTGTTCA CGGGTACGCG CGGTGTCGGC AAGACGACGC TGTCGCGCAT CCTTGCCAAA
TCGCTCAATT GCGTCGGCGC GGACGGGCAG GGCGGCATCA CTGCGCAGCC GTGCGGCGTG
TGCCGCGCCT GCACTGAAAT CGATGCCGGG CGCTTTGTCG ATTACATCGA GATGGATGCC
GCCTCCAACC GCGGCGTCGA CGAGATGGCC CAGTTGCTGG ACCGCGCGGT CTATGCACCC
ACAAGCGGCC GCTTCAAGGT CTACATGATC GACGAAGTGC ACATGCTGAC CAACCACGCC
TTCAATGCGA TGCTGAAGAC GCTGGAAGAG CCGCCCGAGC ACGTCAAGTT CATCCTCGCG
ACCACCGATC CGCAGAAGAT TCCGGTGACG GTGCTGTCGC GCTGCCTGCA GTTCAACCTC
AAGCAGATGC CGCCGGGGCA CATCGTGTCT CACCTCGATC GCATCCTTGG CGAAGAGGGC
ATCGCCCACG AGCCGAACGC GCTGCGTCTG CTGGCCGCCG CCGCCCAGGG TTCGATGCGT
GATGCGCTGT CGCTCACCGA CCAGGCCATC GCGTACAGCG CCGGCGACGT GAGCGAAGCC
GCCGTGCGCG GCATGCTCGG CGCGATTGAT CAGAGCTACC TCGTGCGCCT GCTCGATGCA
CTGGCCGATG AGAACGGCGC CGCGCTTGTC GAGATTGCCG ACGAAATGGC CGGGCGCAGT
CTGAGCTTCT CGGGCGCGCT GCAGGATCTT GCATCCCTGC TGCAGAAGAT TGCGCTGGCG
CAGGTCGTGC CCGCCGCTGT GCAGGACGAT TGGCCAGAGG CTGATGATGT ACGCCGCCTT
GCCGAGCGGT TCGATGCGCA GTCCGTGCAA CTGTTCTACC AGTTTGCCAA CCTGGGCCGC
AACGAATTGG CGCTCGCGCC GGATGAGTAC GCCGGCTTCA CGATGACGCT GCTGCGCATG
CTTGCGTTCC AGCCCGGGCA GTCGGGTGGG GACACGGCGC CGCCTTCTGG CGGTGGCGGC
GGGAAGCGCG CGATGCCGTT GGCTGCAACG CCAGCCGCAT CGACGCGTCC GGCGGTTACG
GCGACTGCGC CTGTGGCGGC GCCGGTTGCT CAGGTGGCGC CGGTGGCGGT GCGTCCGGAG
CCGGTGGTCG AGGCGCCGCG TGCGACTTAT CAGGCAACAC CGCCGGCGCC TGCGCCCGTT
GCTGCGGTTG CGCACACGCC GGCTGCAGCG CCAGCGCGTC GCTCGCCGGC GATGGAAGCC
TTGGCCGCAG CCCGCCAGGC TTCGAACCGT GGCCGTGGCG GTGCTTCCGC ACCTGTCGCC
TCGCCGGTAG CCGCGCCTGC GCCTGCCGCA CGTCCAGCTG CGCCCGCTGT GGGTCCACGT
CCGAATCCTG CTGCTGCTGC GCCGGCATCC GCGCCGCCGC GCCGCGAACA GCCGGCTGGC
GCTGCCGCTG CGTCCGATGA CGGGCCGCCG CCCTGGGATG AAATGCCAGG CGAATTTGCT
TCGCCGCCGC TTGACGAGAT GGACGCCGCG TTTGCCGGCT GGGATTCCGC GTCGAGCATG
CGCCCCGGTG CGCCTGAACC GGCAGCACGT CCAGCGCAGA TCGAGGCGCC GTCAGCCGCG
CTTGTGCCGG TCACGACGAT CGCCCCGGAG CCGTTCGCCG CTGCTACGCC GCCTGATCTG
AGCGCCAGCA GTCTTACAAC GTTCGACGGC AGTTGGCCGG CGCTGGCGGC CAGCCTGCCG
ATCCGCGGCC TGGCTCAACA GCTGGCTTAC CAGAGCGAGT TGGTGGCCGT GGAAGGCGCC
ACGATGCGCC TGCGTGTTCC GTTGCCCCCG CTGACCGACG CCAATGTCGT CGAGCGTCTG
GAGGCAGCAC TCACGGAACA CTTCAGCACG CCCGTTCGCG TGGCGTGTGA TATCGGACCG
GCGCGCGCCA CCGCGGCGGC GGTGGACGCC GAGCAGCGCG CCGAGCGCCA ACGTAGTGCC
GAAGACGCCA TCGCCGCCAA CCCGTTTGTT CAGGCTCTGG TCCGGGACTT TGCTGCGCAG
GTCGTCCCCG GATCGATCCA ACCGCACGCG CACTGA
 
Protein sequence
MSYQVLARKW RPRDFTTLVG QEHVVKALTH ALEQQRLHHA YLFTGTRGVG KTTLSRILAK 
SLNCVGADGQ GGITAQPCGV CRACTEIDAG RFVDYIEMDA ASNRGVDEMA QLLDRAVYAP
TSGRFKVYMI DEVHMLTNHA FNAMLKTLEE PPEHVKFILA TTDPQKIPVT VLSRCLQFNL
KQMPPGHIVS HLDRILGEEG IAHEPNALRL LAAAAQGSMR DALSLTDQAI AYSAGDVSEA
AVRGMLGAID QSYLVRLLDA LADENGAALV EIADEMAGRS LSFSGALQDL ASLLQKIALA
QVVPAAVQDD WPEADDVRRL AERFDAQSVQ LFYQFANLGR NELALAPDEY AGFTMTLLRM
LAFQPGQSGG DTAPPSGGGG GKRAMPLAAT PAASTRPAVT ATAPVAAPVA QVAPVAVRPE
PVVEAPRATY QATPPAPAPV AAVAHTPAAA PARRSPAMEA LAAARQASNR GRGGASAPVA
SPVAAPAPAA RPAAPAVGPR PNPAAAAPAS APPRREQPAG AAAASDDGPP PWDEMPGEFA
SPPLDEMDAA FAGWDSASSM RPGAPEPAAR PAQIEAPSAA LVPVTTIAPE PFAAATPPDL
SASSLTTFDG SWPALAASLP IRGLAQQLAY QSELVAVEGA TMRLRVPLPP LTDANVVERL
EAALTEHFST PVRVACDIGP ARATAAAVDA EQRAERQRSA EDAIAANPFV QALVRDFAAQ
VVPGSIQPHA H