Gene Rpic_1022 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1022 
SymbolgltX 
ID6289456 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1081484 
End bp1082881 
Gene Length1398 bp 
Protein Length465 aa 
Translation table11 
GC content64% 
IMG OID642624591 
Productglutamyl-tRNA synthetase 
Protein accessionYP_001898602 
Protein GI187928115 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0008] Glutamyl- and glutaminyl-tRNA synthetases 
TIGRFAM ID[TIGR00464] glutamyl-tRNA synthetase, bacterial family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.73341e-06 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.120232 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGC GCGTCCGTAC TCGTTTCGCT CCCAGCCCCA CCGGCTTCAT CCACCTCGGC 
AACATCCGCT CGGCACTCTA TCCGTGGGCC TTCGCACGCA AGATGAAGGG AGACTTCATC
CTGCGCATCG AAGACACCGA CGTGGAGCGC TCCAGCCAGG AAGCCGTCGA CGTGATCCTG
GAAGCGATGG ATTGGCTCGA CATGGACATC GACGAAGGCC CGTTCTACCA GATGCAGCGC
ATGGACCGGT ACCGCGCCGT GGTTGCTCAG ATGGTGCAGC AGGAACTCGC CTACCCGTGC
TACATGAGCA CCGAAGAACT CGACGCCCTG CGCGAAGCGC AACGCGAGCG CGGCGAGAAG
CCCCGCTACG ACGGCACCTG GCGCCCCGCA CCCGGCAAGA TTCTGCCGCC GCCGCCGGCC
GGCGTGCAGC CAGTGATTCG CTTCAAGAAC CCCATCGGCG GGAGTGTCGT GTGGGACGAC
GCCGTGAAGG GCCGCATCGA AATCTCCAAC GATGAACTCG ACGATCTCGT GATCGCGCGC
CCGGACGGCA CGCCTACGTA TAACTTCTGT GTGGTCGTCG ACGACATGGA TATGCAGATC
ACGCATGTGA TCCGCGGCGA CGACCACGTC AACAACACGC CCCGGCAGAT CAACATCCTG
CGCGCGCTGG GCGGTACGCC GCCGGTCTAC GCACACCTGC CGACTGTGCT AAACGAGCAG
GGCGAGAAGA TGAGCAAGCG CCACGGTGCC ATGGCTGTCA CGGGCTATCG TGATGCGGGC
TATCTGCCAG AAGCCATCGT CAACTACCTC GCCCGTCTGG GCTGGGCGCA TGGCGACGCC
GAGATCTTTT CGCGCGAGCA GTTCATCGAG TGGTTCGACC TCGAGCACCT GGGCAAGTCG
CCGGCGCAAT ACAACCCTGA GAAGCTTGCC TGGTTGAACA ACCACTACAT CAAGCAGGCT
GACAATGTGC GCCTGGCGGG GCTGGTGAAA CCGTTCATCG AGGCGCTGGG TGGCAAGGTG
GATGGCGGCC CTGTGCTGGC TGACGTGGTT GCGCTCGTGA AGGATCGCGC CAACACGCTG
CGTGAAGTCG CCCAGACAGC GCTGCTGTTC TATCGCTCGG ATCTGGCTGT CGAGCCGGAG
CTCGCTGCGC AGCACCTGAC CGACGACGTG CGTCCTGGCA TTGCGGCGCT GGCTGAGAAG
CTCGGGGCGC TGCCCGAGTG GAAGCGCGAG GCCATCGGCG CAGTCTTCAA GGAAGTTCTG
GCGGCCCACG GCTGGAAGAT GCCCAAGCTG GCGATGCCGG TGCGCCTGCT GGTGGCAGGG
CAACTGCAAA CGCCGTCGAT TGATGCGGTG CTGGAGTTGT TCGGTCGCGA CGTCGTTCTG
CATCGTCTGG CGGCGTGA
 
Protein sequence
MTQRVRTRFA PSPTGFIHLG NIRSALYPWA FARKMKGDFI LRIEDTDVER SSQEAVDVIL 
EAMDWLDMDI DEGPFYQMQR MDRYRAVVAQ MVQQELAYPC YMSTEELDAL REAQRERGEK
PRYDGTWRPA PGKILPPPPA GVQPVIRFKN PIGGSVVWDD AVKGRIEISN DELDDLVIAR
PDGTPTYNFC VVVDDMDMQI THVIRGDDHV NNTPRQINIL RALGGTPPVY AHLPTVLNEQ
GEKMSKRHGA MAVTGYRDAG YLPEAIVNYL ARLGWAHGDA EIFSREQFIE WFDLEHLGKS
PAQYNPEKLA WLNNHYIKQA DNVRLAGLVK PFIEALGGKV DGGPVLADVV ALVKDRANTL
REVAQTALLF YRSDLAVEPE LAAQHLTDDV RPGIAALAEK LGALPEWKRE AIGAVFKEVL
AAHGWKMPKL AMPVRLLVAG QLQTPSIDAV LELFGRDVVL HRLAA