| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_1021 |
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| Symbol | |
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| ID | 6287342 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 1080322 |
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| End bp | 1081278 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624590 |
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| Product | Patatin |
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| Protein accession | YP_001898601 |
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| Protein GI | 187928114 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1752] Predicted esterase of the alpha-beta hydrolase superfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.000453292 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.111336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAACGCC GCCTTTTCCT GGGTGCCGCC GGCGCCTCCG TGCTCTCCGC CTGCACCGTG
ACGGGTTTCT CGTCCGGCAA AACCGAAACG CCCGTCACCC CCGCCACGGC CGTGCTGCCG
CCCACGACTC AACCAGCCAC ACAGCCCGTG CGGATCGGGT TGGCACTGGG CGGAGGTGCC
GCGCGCGGTT TTGCGCACAT CGGCGTCATC AAGATGCTGG AAGCCCAAGG CATTCAGATC
GACTTCATCA CCGGCACGAG CGCGGGTAGC GTGGTAGCGG CGATCTACGC GTCGGGCATG
TCGGGGCTGG AGATGAACCG CATGGCGCTC AAGATGGACG AGGCCATGAT CGCCGATTGG
GCGCTGCCCT TCGGCACGCG CTTCGGCGGC TGGCTCAAGG GCGAGGCGCT GGAGAAATAC
ATCAACCGGC TGGTCAAGCA GAAGACGATC GAGCAGATGC GCATTCCACT CGGCATCGTT
GCGACGGACC TGGCGAGCGG CAAGCCGATC CTGTTCCGGC GCGGCAATAC CGGTCAGGCG
GTGCGTGCGT CCTGCAGTAT CCCGGGCGTG TTCCAGCCGG TAACGATCAG CGGTCGCCAA
TATGTGGACG GCGGCTTGGT GGCGCCAGTG CCGGTTACCT ACGTCAAGCA GATGGGCGCG
ACGTTCGTGA TTGCAGTGAA CATCTCGGCA GACCCTGCCA ACCAGGCTGT GTCGGGACAG
GCGAGCATGC TGCTGCAGAC GACAGCCATC ATGGGTCAGA GCATCAGCAA GACCGAGCTG
GCCCAGGCCG ATGTGGTCAT CACACCGTCG CTGCCGTTTG TGAAGGGCAG CGACTTTACC
GCGCGCAACG AGGCGATTCT CGCGGGCGAG CAGGCTGCTC AGGCCGCCAT GCCGCTGCTG
CGGGAAAAGC TGCATCTGAC GCAGACCATC GTGGGCACCC CGTTGCCGCC GCACTGA
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| Protein sequence | MQRRLFLGAA GASVLSACTV TGFSSGKTET PVTPATAVLP PTTQPATQPV RIGLALGGGA
ARGFAHIGVI KMLEAQGIQI DFITGTSAGS VVAAIYASGM SGLEMNRMAL KMDEAMIADW
ALPFGTRFGG WLKGEALEKY INRLVKQKTI EQMRIPLGIV ATDLASGKPI LFRRGNTGQA
VRASCSIPGV FQPVTISGRQ YVDGGLVAPV PVTYVKQMGA TFVIAVNISA DPANQAVSGQ
ASMLLQTTAI MGQSISKTEL AQADVVITPS LPFVKGSDFT ARNEAILAGE QAAQAAMPLL
REKLHLTQTI VGTPLPPH
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