Gene Rpic_1019 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1019 
Symbol 
ID6287340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1079047 
End bp1079445 
Gene Length399 bp 
Protein Length132 aa 
Translation table11 
GC content60% 
IMG OID642624588 
ProductISPsy11, transposase OrfA 
Protein accessionYP_001898599 
Protein GI187928112 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.00833205 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0895755 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGGC AGAAGAAGCG AACGCAGAGG GACTACACGC TGGCTTTTAA GTTGGCAGTG 
GTTGAGCAGG TGGAAAAAGG CGAGCTGACC TACAAAGAGG CGCAGCGACG CTATGGCATT
CAGGGTCGCT CGACGGTGCT GGTATGGTTG CGCAAGCACG GACGACAGGA CTGGAGCGCC
TCGGCGGCGG CCAAAACCAC GATGGGAAAT CAAACCAGCC AGCGCAAGCC GCTCACGCCT
GAGCAGCGCA TCAAGGAATT GGAAGTGCAG TTGCGGGAGG CCCAAGAGAA GGCACGCCTG
TTCGAGGCGG TGATCGACGT GATCCAGAAA GAGCATGGGG CGCGCGTCGT AAAAAAGCCT
TCGGGCAGGT CCTCACGCAA AAGCTCGTCC AAGGGCTGA
 
Protein sequence
MDGQKKRTQR DYTLAFKLAV VEQVEKGELT YKEAQRRYGI QGRSTVLVWL RKHGRQDWSA 
SAAAKTTMGN QTSQRKPLTP EQRIKELEVQ LREAQEKARL FEAVIDVIQK EHGARVVKKP
SGRSSRKSSS KG