Gene Rpic_1008 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_1008 
SymbolcysS 
ID6288063 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1064684 
End bp1066075 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content63% 
IMG OID642624576 
Productcysteinyl-tRNA synthetase 
Protein accessionYP_001898588 
Protein GI187928101 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0215] Cysteinyl-tRNA synthetase 
TIGRFAM ID[TIGR00435] cysteinyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0156033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.100097 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATCAC TCAAGATCTA CAACACGCTC GCGCGTGAGA AACAGACGTT CGTCCCCATC 
GAGCCCGGCC GCGTGCGCAT GTACGTGTGT GGCATGACGG TGTACGACTA CTGTCACGTC
GGGCATGCGC GGGTCATGGT GGTGTTCGAC ATGGTGCAGC GTTGGCTGCG CGCGGCCGGT
TACGACGTCA CCTACGTGCG CAACATCACC GACATCGACG ACAAGATCAT CAAGCGTGCG
GTCGAGAACG GCGAGACGAT GAGTGCGCTG ACGGGCCGCT TCATCGCTGC CATGCACGAA
GACGCCGATG CGCTTGGCGT GCAGCGCCCG GACCACGAAC CCCGCGCCAC CGAATACGTG
CCGCAGATGC TGAGCATGAT CGGCAGGCTG CAGACGAACG GCCTCGCCTA TCAGGCGACC
GACGGCGATG TGAACTACGC GGTGCGCAAA TTCCCCGGTT ACGGCAAGCT GTCCGGCAAG
TCGCTCGAAG ACCTGCGCGC CGGCGAGCGC GTGGCGGCCA ATGATGCCAA GCAGGACCCG
CTCGACTTCG TGCTGTGGAA ATCCGCCAAG GCCGACGAAC CGGCTGAATC GCGCTGGGCG
TCGCCGTGGG GCGAGGGCCG TCCGGGCTGG CATATCGAAT GCTCGGCGAT GAGCTGCGAG
CTGCTGGGCG AGCATTTCGA TCTGCACGGT GGCGGCGCCG ATCTGCAGTT CCCGCATCAC
GAGAATGAAA TTGCGCAGTC CGAAGGGGCG ACCGGCAAGA CGTTCGTCAA CATGTGGATG
CACAACGGCT TCGTCCGTGT GAATGACGAG AAGATGTCGA AATCGCTCGG CAACTTCTTC
ACCATCCGTG ACGTGCTGAA AGTGTACGAC GCGGAAGTCG TGCGTTTCTT CATCCTGCGC
TCGCACTATC GCAGTGACCT GAATTACAGC GACGCCCACC TCGACGACGC GCGCCATGCG
CTCACGCGCC TGTACACCGC GCTCAAGGAT GTGCCGGCGG CGGTGGGTGC AAAACCCGAC
TGGAGCGAGT CGCATGGCAA GCGCTTCCTC GAAGCGATGA ACGACGACTT CAATACGCCG
GTCGCCGTGT CGGTGTTGTT TGAACTCGCG AGCGAAGTGA ACAAAACGCG CTCGCCCGAA
CTGGCCAGCC AACTGGCTGC GCTGGCCGGC GTGATCGGCC TGCTCGGCCG CGATCCGCAT
GTGTTCCTGC AGGGCGGTGT GTCGGCCGAT GGTGTGGACG CGGCAGAAGT GGAAGCGCGT
ATCGAAGAGC GCCGCGCCGC CAAGGCTGCC CGCGATTTTG CCCGCGCTGA TGCCATCCGT
GCCGATCTGC TGGCCGCCGG CATTGTCCTC GAAGACAAAC CGGGTGGCCT GACCGAGTGG
AGACGCGCAT GA
 
Protein sequence
MESLKIYNTL AREKQTFVPI EPGRVRMYVC GMTVYDYCHV GHARVMVVFD MVQRWLRAAG 
YDVTYVRNIT DIDDKIIKRA VENGETMSAL TGRFIAAMHE DADALGVQRP DHEPRATEYV
PQMLSMIGRL QTNGLAYQAT DGDVNYAVRK FPGYGKLSGK SLEDLRAGER VAANDAKQDP
LDFVLWKSAK ADEPAESRWA SPWGEGRPGW HIECSAMSCE LLGEHFDLHG GGADLQFPHH
ENEIAQSEGA TGKTFVNMWM HNGFVRVNDE KMSKSLGNFF TIRDVLKVYD AEVVRFFILR
SHYRSDLNYS DAHLDDARHA LTRLYTALKD VPAAVGAKPD WSESHGKRFL EAMNDDFNTP
VAVSVLFELA SEVNKTRSPE LASQLAALAG VIGLLGRDPH VFLQGGVSAD GVDAAEVEAR
IEERRAAKAA RDFARADAIR ADLLAAGIVL EDKPGGLTEW RRA