Gene Rpic_0981 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0981 
Symbol 
ID6286878 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1036892 
End bp1037971 
Gene Length1080 bp 
Protein Length359 aa 
Translation table11 
GC content66% 
IMG OID642624549 
ProductFAD-dependent pyridine nucleotide-disulphide oxidoreductase 
Protein accessionYP_001898561 
Protein GI187928074 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0492] Thioredoxin reductase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.0886227 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.149917 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTTCCG CCGCCACTCT CAACGCCGAT TCCCCCCAGC CCGTGGAGCA ACGCACCGAC 
GTGCTTGTCG TGGGCGCTGG GCCGGTAGGC CTGTTCGCGG CGTTCCAGGC GGGCGTGCTT
GGCATGTCGT GTGTGCTGGT GGATGCATTG GACCGCCCGG GTGGTCAATG CACAGAGCTG
TACCCGGAAA AACCCATCTA CGACATCCCG GCGCTGGTGT CGTGCACCGC ACAGGAACTC
GTCGATCGGC TGATGGCCCA GTGCGCGCCG TTCAACTACC CCATCCTGTG TGGTCGCCGG
GCCGAAACCG TGGAAACGCT GGAAAACGAG CACGGCCGGC GCTTTCGGGT CACCACCAGC
GCCGGCGACG TGTTCGACTG CGCCGCCGTA CTCATCACGG CAGGCAACGG CGCGTTCACC
CCACAACGTG TGGCTTTGCC TGAAGCGGCC GCACTGGAAG GCCGCCATCT GCACTATGCC
GTGCGCGACA CCGCGCGCTT TACGGGCAAG CGCGTCGTCA TTGCCGGCGG CGGGGATTCC
GCGCTCGACT GGGCGCTCGC GCTGCGCAAA GTCGCCGCAC GCGTGACACT GGTCCATCGG
CGAGAGGGCT TCCGCGCAGC CGATGCCAGC GTTGCTGAAA TGCGCGCCGC CGTCGTCGCC
GGCGAAATGG ATTTCGTGCT CGGCATGCTT TCGCGCCTGG ACAGCACGCC CGACGGCACG
CTCATCGGCG CAGCCATCCG CGGGCGCGAC GGCGAAACCG TTCTGCCCTG CGATGAACTG
ATCGCCCTGT ATGGTCTGGT TTCCGAGCCA GGCCCGATTG TCAACTGGGG CGTGGAGATG
CGCGCCGGCC GCATCACGGT GGAAACAACG GCGTACGAGA CCTCGCGCCC GGGCGTGTTC
GCGGCGGGCG ATATCGCGCT GTATCCGAAC AAGCAGAAGC TGATTCTGTC GGGCTTCCAT
GAAGTGGCGA TGGCGCTGCG GCGCGCCTAC CGGTATGCGA ATCCGGACAA GACGCTGGTG
CATACGCATT CGAGCAACGA CGCCGGGCTG CAGACGAAAC TGCATGTAAC GGCGGAATAA
 
Protein sequence
MTSAATLNAD SPQPVEQRTD VLVVGAGPVG LFAAFQAGVL GMSCVLVDAL DRPGGQCTEL 
YPEKPIYDIP ALVSCTAQEL VDRLMAQCAP FNYPILCGRR AETVETLENE HGRRFRVTTS
AGDVFDCAAV LITAGNGAFT PQRVALPEAA ALEGRHLHYA VRDTARFTGK RVVIAGGGDS
ALDWALALRK VAARVTLVHR REGFRAADAS VAEMRAAVVA GEMDFVLGML SRLDSTPDGT
LIGAAIRGRD GETVLPCDEL IALYGLVSEP GPIVNWGVEM RAGRITVETT AYETSRPGVF
AAGDIALYPN KQKLILSGFH EVAMALRRAY RYANPDKTLV HTHSSNDAGL QTKLHVTAE