Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0955 |
Symbol | |
ID | 6288353 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 1011826 |
End bp | 1012593 |
Gene Length | 768 bp |
Protein Length | 255 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642624521 |
Product | protein of unknown function DUF899 thioredoxin family protein |
Protein accession | YP_001898535 |
Protein GI | 187928048 |
COG category | [S] Function unknown |
COG ID | [COG4312] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.000224117 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0204099 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAGTCCG GGGTCTTAGA CAAAGGGGCG ATCATGCAAG CGCATCCCGT AGTTTCCAGA GACGAATGGC TCATCAAACG CAGGGCGCTG CTGGCTCGCG AGAAGGAGGC CATCCATCTG CGCGACGCCA TCAACGCCGA GCGCCAGGCG CTGCCGTGGG TCAAGGTCGA TACGGAATAC GAATTTGACT CGCCGGAAGG CAAGAAGACG CTGGCCGAGC TGTTTGACGG CCGCAGCCAG TTGATGGTCT ACCACTTCAT GCTCGGCCCC GACTGGGGCG CGGGCTGTCC CGGGTGCTCC TTCCTGTCCG ACCATATTGG CGGAATGCTC ACGCATCTGA ACCACCATGA CGTGACGTTC GTCGCCGTAT CTCGCGCGCC GATCGACAAA ATCGCGGCCT ACAAGAAGCG CATGGGCTGG CAATTCCCGT GGGTGTCGTC GTTCGGTACG GCGTTCAACC ACGACTACCG GGTGAGCTTC TCGCAAGACG AACTCGCAAG CGGCTCGGTC GACTACAACT ACACGGCAAC GCCCCGTGAA GACGCCCACG ACGAGTTGCC CGGAATGAGC GCGTTTTACA AGGACGAGGC GGGCAATGTC TTCCACACGT ACTCGACGTA TGCGCGCGGC TTGGAAGACA TGCTAGGGAC ACTGCTGCTA CTTGACCGTG CGCCGCTCGG CCGCAACGAG ACCGGCCCCA TGTCATGGGT GCGCCGTCAC GATGAATACG AAGACGCGCC GAAGGCGCAC GCATGCTGCG CGACGTAA
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Protein sequence | MESGVLDKGA IMQAHPVVSR DEWLIKRRAL LAREKEAIHL RDAINAERQA LPWVKVDTEY EFDSPEGKKT LAELFDGRSQ LMVYHFMLGP DWGAGCPGCS FLSDHIGGML THLNHHDVTF VAVSRAPIDK IAAYKKRMGW QFPWVSSFGT AFNHDYRVSF SQDELASGSV DYNYTATPRE DAHDELPGMS AFYKDEAGNV FHTYSTYARG LEDMLGTLLL LDRAPLGRNE TGPMSWVRRH DEYEDAPKAH ACCAT
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