Gene Rpic_0945 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0945 
Symbol 
ID6288666 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp1000337 
End bp1001092 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content65% 
IMG OID642624512 
ProductGntR domain protein 
Protein accessionYP_001898527 
Protein GI187928040 
COG category[K] Transcription 
COG ID[COG2186] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.280817 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0677412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCACCG CCAGTTCGCC CGCAACGCAC GTGCGCCGCA CCCAAAGCCT GGCGGACGTA 
GTGGTGGACC ACATCAAAGG GCGCATCGCC AACGAATCGC TGCGCATTGG CGACAAGCTG
CCGACGGAAT CCGCATTGAT GGAAGCGCTG GGCGTGAGCC GCACGGTGAT ACGCGAAGCC
ATTTCGCGCC TGCAAGCCAA GGGGATGATC GAAACGCGGC ACGGCATCGG CAGCTTTGTC
CTGCCGCCGC GCGCAGACAA CAGCATCCCG CTGGGCGATG CCTCCACGAT GCACGACATT
CTGAGCATGC TGGAATTGCG CGTCGCCATT GAGACGGAGT GCGCTGGCCT GGCCGCACAG
CGCATTTCTC CCACCGAGAT CGATGCCCTG CGTTTGGCAC TCGAAGCCAT TGAGCAGGAC
CAGGCGGACG GCAACGACAG CGCCACCTCC GACCTGCAGT TTCACCTCAG CATCGCGCGC
GCCACCGGCA ATGAACATTT TGTCGGCGCC CTCGCCCAAC TCGGCAAGAC GCTCATCCCT
CGCACGCGGA TCGGGCTGGC ACAGGTCGGA TACCTGAACG CTCCGGAACT GCGCGCCACG
GTCAACCGCG AGCACCACAG CGTCTTTGAA GCCATCGCCC GCAAAGACCC TGAAGCCGCC
CGCGCTGCCA TGCGCATGCA TCTGTCAAAC AGCCGGGAAC GCCTGCGTCG TGCGCACGAA
GCGGCTGGCA CTCAATCGGC CGCGACAGGC AGCTGA
 
Protein sequence
MPTASSPATH VRRTQSLADV VVDHIKGRIA NESLRIGDKL PTESALMEAL GVSRTVIREA 
ISRLQAKGMI ETRHGIGSFV LPPRADNSIP LGDASTMHDI LSMLELRVAI ETECAGLAAQ
RISPTEIDAL RLALEAIEQD QADGNDSATS DLQFHLSIAR ATGNEHFVGA LAQLGKTLIP
RTRIGLAQVG YLNAPELRAT VNREHHSVFE AIARKDPEAA RAAMRMHLSN SRERLRRAHE
AAGTQSAATG S