Gene Rpic_0926 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0926 
Symbol 
ID6289031 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp980713 
End bp981606 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content59% 
IMG OID642624490 
Productsignal peptidase I 
Protein accessionYP_001898508 
Protein GI187928021 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0681] Signal peptidase I 
TIGRFAM ID[TIGR02227] signal peptidase I, bacterial type 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.592083 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.151017 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACTTCG CCCTGATTCT GTTTGTTCTC GTCGTCCTCA CTGGTATCGC GTGGGTGGCT 
GACAAGCTCG TGTTCCAGCG CCAGCGTCAG GCGGCTGCGG CCACGGCGCT GGCTGAATTC
GACGCTCGCG CGCAGGTGCA GGCGCAGTAC GGCGGTGGCG GCGACATCGG TGCCGCGCGT
TTGCAACTGG CTGAAGACAA GTTGCGCCAG CCGTGGTGGC TCGAGTACAC CGCCAGCTTC
TTCCCGGTGA TCGCCGCGGT GTTCCTGCTG CGCTCGTTCG TGATCGAGCC GTTCAAGATT
CCGTCGGGAT CGATGATTCC GACGCTGCAG ATCGGCGATT TCATCCTGGT CAACAAGTAC
ACGTATGGCA TTCGTTTGCC GATCGTGAAC AAGAAGATCG TCGAACTCAA TCAACCGCAA
CGTGGCGACG TGATGGTCTT TCGCTATCCG AAAGACGAGT CGATGGACTA CATCAAGCGC
GTGATCGGCG TGCCCGGCGA CGTGGTGAAG TATGACAACA AGCGCCTGAC CGTGAACGGC
CAGCCGGCAA CCTACGCGCC GCAGTCCGAT TACCTTGATG GCGAGCGCCT GACGTACTCG
AAGCAGTACC AGGAGACGCT GGGGAACGTG ACGCACAACA TCCTGAACGA TGCCGACCGC
CCGGCCTATG TCTCCGGTCC GGATGATTTT CCGTTCCGCG AAAACTGCAC TTACAATCAG
ACCGGCTTCA CCTGCAAGGT ACCTGCAGGT CACTATTTTA TGATGGGCGA TAATCGCGAC
AACAGCGCGG ACTCCCGCTA TTGGGGCTTC GTGCCGGACA AGAACATCGT CGGGAAAGCG
TTCTTCATCT GGATGAACCT GGGTGACCTG AAGCGGATCG GTGGTTTCCA TTGA
 
Protein sequence
MNFALILFVL VVLTGIAWVA DKLVFQRQRQ AAAATALAEF DARAQVQAQY GGGGDIGAAR 
LQLAEDKLRQ PWWLEYTASF FPVIAAVFLL RSFVIEPFKI PSGSMIPTLQ IGDFILVNKY
TYGIRLPIVN KKIVELNQPQ RGDVMVFRYP KDESMDYIKR VIGVPGDVVK YDNKRLTVNG
QPATYAPQSD YLDGERLTYS KQYQETLGNV THNILNDADR PAYVSGPDDF PFRENCTYNQ
TGFTCKVPAG HYFMMGDNRD NSADSRYWGF VPDKNIVGKA FFIWMNLGDL KRIGGFH