| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0916 |
|---|
| Symbol | |
|---|
| ID | 6287567 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12J |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010682 |
|---|
| Strand | + |
|---|
| Start bp | 970285 |
|---|
| End bp | 971214 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 642624480 |
|---|
| Product | cyclic nucleotide-binding protein |
|---|
| Protein accession | YP_001898498 |
|---|
| Protein GI | 187928011 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0331] (acyl-carrier-protein) S-malonyltransferase |
|---|
| TIGRFAM ID | [TIGR00128] malonyl CoA-acyl carrier protein transacylase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.169682 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATTCG CTTTCGTCTT CCCCGGCCAG GGTTCGCAAT CGGTCGGCAT GCTCAATGCG
TTTGCCGATC ATCCGGCCGT GGCCGCTACG CTGGTCGAGG CGTCCGACGC GCTGGGCCAG
GACATCGGCA AGCTGATTGC CGAAGGCCCG GCTGAAGAGC TGAACCTGAC GACCAATACG
CAACCCGTCA TGCTGACGGC GGCAGTTGCC GTCTATCGTG CATGGCAAGC TGCCGGCGGC
CCGACGCCGA CCGTCGTGGC TGGGCATAGC CTTGGCGAGT ATTCGGCGCT TGTCGCCGCG
GGCGCCATCG CGTTCCAAGA CGCTGTACCG TTGGTGCGTT TCCGCGCCAA GGCGATGCAG
GAAGCTGTGC CGGTGGGCGA GGGCGGTATG GCTGCGATCC TCGGCCTGTC GGACGATGAC
GTGCGCGCCG CATGCGCGGA AGCTTCGGTC GCAGGCGTCG TCGAAGCCGT GAACTTCAAC
GCGCCGGCCC AGGTGGTGAT CGCCGGTGCC AAGGCGGCCG TCGAGAAGGC TTGCGAAATC
GCCAAGGCCA AGGGTGCCAA GCGCGCGCTG CCGCTGCCGG TGTCGGCGCC GTTTCACTCG
TCGCTGCTCA AGCCGGCGTC GGATCGTCTG CGGGAGTATC TCGCCAACGT GGCCGTCACC
ACCCCGGTGA TCCCCGTCAT CAATAACGTG GACGTTGCTG TCGTGAGCGA CCCGGCGGCC
ATCAAGGATG CGCTGGTGCG CCAGGCAGCA TCGCCGGTGC GCTGGGTTGA GACCATCCAG
AAGATGAAGG GTGACGGCAT TACCCGCGTG GTCGAATGCG GCCCGGGCAA GGTGCTGGCC
GGTCTGGTCA AGCGTATCGA TGGGGAGATC GTCGGTGACG CGATCTTCGA TCCGGCGTCG
CTGGAAGCCG TGCTGGGTCA ACTCAAATAA
|
|---|
| Protein sequence | MTFAFVFPGQ GSQSVGMLNA FADHPAVAAT LVEASDALGQ DIGKLIAEGP AEELNLTTNT
QPVMLTAAVA VYRAWQAAGG PTPTVVAGHS LGEYSALVAA GAIAFQDAVP LVRFRAKAMQ
EAVPVGEGGM AAILGLSDDD VRAACAEASV AGVVEAVNFN APAQVVIAGA KAAVEKACEI
AKAKGAKRAL PLPVSAPFHS SLLKPASDRL REYLANVAVT TPVIPVINNV DVAVVSDPAA
IKDALVRQAA SPVRWVETIQ KMKGDGITRV VECGPGKVLA GLVKRIDGEI VGDAIFDPAS
LEAVLGQLK
|
|---|
| |