Gene Rpic_0915 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0915 
Symbol 
ID6288548 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp969272 
End bp970252 
Gene Length981 bp 
Protein Length326 aa 
Translation table11 
GC content65% 
IMG OID642624479 
Product3-oxoacyl-(acyl carrier protein) synthase III 
Protein accessionYP_001898497 
Protein GI187928010 
COG category[I] Lipid transport and metabolism 
COG ID[COG0332] 3-oxoacyl-[acyl-carrier-protein] synthase III 
TIGRFAM ID[TIGR00747] 3-oxoacyl-(acyl-carrier-protein) synthase III 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.170701 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACGTT TCGCAAGGAT CATCGGTACG GGCAGCTACC TGCCGCCCAA GCGGGTCACC 
AATGACGAAC TGGCGGCCCA GTTGGCCGAG AAGGGTATCG AGACGAGCGA CGAATGGATC
GTCTCGCGCA GCGGCATTCG GGCGCGTCAT TTCGCCGAGC CGGATGTCAC GTGCAGCGAC
CTCGCCGTAA GGGCGGCCGA GCGCGCGATC GAAGCCGCCG GCATCGATCG CTCCGAACTC
GACCTGATCC TGGTGGCGAC GTCCACGCCG GATTTCGTGT TCCCGAGCAC GGCGTGCCTG
GTGCAGCAAA AGCTCGGCAT CACCAACGGG TGCGCCGCGT TCGACGTGCA GGCCGTGTGT
TCCGGCTTCG TCTACGCGCT GGCAACCGCC GACAAATTTA TCCGCTCGGG TGCCTATCGC
AACGTGCTGG TGATTGGCTC CGAGGTCTTC TCGCGCATCA TCGATTTCAG CGATCGCACC
ACTTGTGTCC TGTTTGGCGA TGGCGCTGGC GCCGTGGTGC TGCAGGCTTC TGACGAGCCG
GGCATCCTGT CGACTGCGCT CCATGCTGAC GGCAGCCACG CCAACATCCT GTGCGTGCCG
GGCAACGTGG CCGCGGGTGC AATCCAGGGC AGCGCCTTCC TGTACATGGA TGGTCAGGCT
GTCTTCAAGC TGGCCGTCAC GGTGCTCGAC AAGGTTGCCC GTGAAGCACT GGCAGCGGCG
GAACTCGATG CCTCGCAAGT CGACTGGTTG ATCCCGCACC AGGCGAACAT CCGCATCATG
CAGGGCACGA CCAAGAAGCT GGGCCTCTCG AACGAGCGCC TGATCGTGAC CGTCGATGAG
CATGGCAACA CGTCGGCTGC CTCGATTCCC CTGGCGCTCG ATGTTGCTGT GCGCGACGGT
CGCATCCAGC GCGGCCAGCA TGTGATGCTC GAGGGCGTGG GCGGCGGCTT CACATGGGGC
GCCGCGCTGC TGCGCTTCTG A
 
Protein sequence
MTRFARIIGT GSYLPPKRVT NDELAAQLAE KGIETSDEWI VSRSGIRARH FAEPDVTCSD 
LAVRAAERAI EAAGIDRSEL DLILVATSTP DFVFPSTACL VQQKLGITNG CAAFDVQAVC
SGFVYALATA DKFIRSGAYR NVLVIGSEVF SRIIDFSDRT TCVLFGDGAG AVVLQASDEP
GILSTALHAD GSHANILCVP GNVAAGAIQG SAFLYMDGQA VFKLAVTVLD KVAREALAAA
ELDASQVDWL IPHQANIRIM QGTTKKLGLS NERLIVTVDE HGNTSAASIP LALDVAVRDG
RIQRGQHVML EGVGGGFTWG AALLRF