Gene Rpic_0914 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0914 
Symbol 
ID6288547 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp968173 
End bp969234 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content63% 
IMG OID642624478 
Productputative glycerol-3-phosphate acyltransferase PlsX 
Protein accessionYP_001898496 
Protein GI187928009 
COG category[I] Lipid transport and metabolism 
COG ID[COG0416] Fatty acid/phospholipid biosynthesis enzyme 
TIGRFAM ID[TIGR00182] fatty acid/phospholipid synthesis protein PlsX 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.0833553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCA AGCTTGCCAT CGACTGCATG GGTGGCGATC ACGGCGTTGG CGTGACAATC 
CCTGCAGCGA TCCATTTTCT CGCCGTACAC GAAGACGTCG AAATGCTGCT CGTCGGGCAG
CCCGATGCCA TCGCGGCGCA GCTCAAGCGA CTTCACGCCA CCGCGAACCC GCGCGTCCAC
GTCGTCCCCG CCTCCGAGGT GGTGTCGATG GACGATCCGG TCGAGGTCGC GCTGCGTAAG
AAGAAAGATT CTTCAATGCG CGTGGCCATC AATCAACTCA AGGAAGGCGC CGCTCAGGCG
TGCGTTTCCG CCGGCAACAC CGGCGCGTTG ATGGCCGTGT CGCGTTACGT TCTCAAGACG
CTGGACGGCA TTGACCGCCC GGCAATTGCC ACCGCCATCC CGAACGAGAA AGGTGCCGGC
ACGACCGTGC TGGATCTTGG TGCCAACGCC GACTGCGAGC CCGAGCACCT GCTGCAGTTT
GCGCAGATGG CCTCGGCGAT GGTGTCGGTG GTCGAGCAGA AGCCGCGTCC AACGGTCGGT
CTGCTCAACA TTGGCGAAGA AGTCATCAAG GGCAACGAGG TCGTTAAGCA GGCCGGTGAG
CTGCTGCGCG CCTCCGATCT CAACTTCTTC GGCAACGTTG AAGGCAACGA CATCTTCAAG
GGCACGACCG ACATCGTTGT CTGCGACGGC TTTGTCGGCA ACGTGGCGCT CAAGAGCACC
GAAGGACTGG CCAAGATGAT CGGTGAGATG CTGCGCCAGG AATTCAGCCG CTCGTGGTTC
ACCAAGTTGC TCGCTGTCGT GGCGCTGCCG GTGCTGACGC GTTTCAAACG GCGCGTTGAT
CATCGGCGCT ACAATGGCGC CGCGCTGCTC GGTCTGCGTG GGCTGGTCAT CAAGAGTCAC
GGCTCGGCCG ACGCCTACGC GTTCGAATGG GCCATCAAGC GTGCCTACGA CGCCGCGGCC
AACGGCGTGA TCGCCCGCAT TGCGCAGGCG TTCGAATCGC ACCATGACGC AGCGGGCGCT
GCGCCGGTCT CCACTTCCGC TCCGGCCGCC GACGCTGCTT GA
 
Protein sequence
MTIKLAIDCM GGDHGVGVTI PAAIHFLAVH EDVEMLLVGQ PDAIAAQLKR LHATANPRVH 
VVPASEVVSM DDPVEVALRK KKDSSMRVAI NQLKEGAAQA CVSAGNTGAL MAVSRYVLKT
LDGIDRPAIA TAIPNEKGAG TTVLDLGANA DCEPEHLLQF AQMASAMVSV VEQKPRPTVG
LLNIGEEVIK GNEVVKQAGE LLRASDLNFF GNVEGNDIFK GTTDIVVCDG FVGNVALKST
EGLAKMIGEM LRQEFSRSWF TKLLAVVALP VLTRFKRRVD HRRYNGAALL GLRGLVIKSH
GSADAYAFEW AIKRAYDAAA NGVIARIAQA FESHHDAAGA APVSTSAPAA DAA