Gene Rpic_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0912 
Symbol 
ID6288545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp967151 
End bp967687 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content62% 
IMG OID642624476 
Productprotein of unknown function DUF177 
Protein accessionYP_001898494 
Protein GI187928007 
COG category[R] General function prediction only 
COG ID[COG1399] Predicted metal-binding, possibly nucleic acid-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.802583 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.107154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGATTTTC GTGCATTCGA TCTTTTCGCG TTCATTCGCG CGGGTGAGCC GGCAAGCGGC 
ACGGTCTATC TGACCGATAC GCCTCGTCTG CTGTCCGAGC AAGCCGTCGA CGCCCCGGCT
GACGCCAACA CGCAATTTCG TTGGCAGCTG CAGGGTGTGG CGCGCGAGGA GGCCACCGCC
GGCCAGTTGC CGCGTCAGCG GCTCTTCGTG GATCTGGAAG TGGATGGCGC CATCTGGCTG
CAATGTCAGC GGTGCCTCAA AGCTTACGAG CAGCCTCTGC CGGTGCGCGC GCGTCTGGAA
GTCGTGCGCT CGGAAGCCGA TGCCGATGCC GCCCCGCTGG ATGACGATGA GGCTGATGTC
ATCGTTGGCT CGCGCAGCTT CGATCTGATC ACGCAGATCG AAGATGAGCT GTTGCTGGCG
TTGCCGGTGT CGCCGCGTCA TGCAGTCTGC CCGGATGAGA TGTTGCCGGA AGAGACTGAA
GCTGAAAAGA AGCCGTCGCC GTTCGCGGTG CTGGCCAACC TTAAGACCAA ACATTAG
 
Protein sequence
MDFRAFDLFA FIRAGEPASG TVYLTDTPRL LSEQAVDAPA DANTQFRWQL QGVAREEATA 
GQLPRQRLFV DLEVDGAIWL QCQRCLKAYE QPLPVRARLE VVRSEADADA APLDDDEADV
IVGSRSFDLI TQIEDELLLA LPVSPRHAVC PDEMLPEETE AEKKPSPFAV LANLKTKH