Gene Rpic_0909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0909 
Symbol 
ID6288720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp964515 
End bp965609 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content62% 
IMG OID642624473 
Productpeptidase S49 
Protein accessionYP_001898491 
Protein GI187928004 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0616] Periplasmic serine proteases (ClpP class) 
TIGRFAM ID[TIGR00706] signal peptide peptidase SppA, 36K type 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0531296 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGACT CGATTCCGCC GAAAGGGCCC GACGACGCCC CCAACGAGGG TGCAGGCAAA 
CCAGAAGCGC TGGAAGTCAC ACAGCATGCG GATCATCCGC TTGAAGCTGA ATTGCGTAAC
CCGCCCGCAT CGGCATCGGC AGCTTCTGCG CCGGCCGGCG GCTGGGAGCG TGAGGTACTC
GAAAAAGTAC TGATGGCAAC GGTCCGTGAG CAGCGCGCCG CGCGCCGCTG GCGCATCTTT
TTCCGCTTCG TGGCTCTGGG CCTGATCGGA GTGCTTATTT ATGCGTTCGC CAGCTTGGAG
GGCGAAACCG TCAGCACGGG CCGCCACACA GCGATTGTCA CGCTGGAGGG CGAAATTGCG
GCGAACACAA ACGCCAGCGC CGAAAACATC AACGCATCCT TGCAGGCCGC GTTTGCAGAT
GACAACACCG TCGGTGTGAT CCTGAAGATC AATTCGCCGG GCGGCTCGCC GGTGCAGGCG
GGCATGATCA ACGATGAAAT CCGCCGTCTT CGCGCCAAAT ACAAGAAGAT TCCGCTGTAC
GTCGTCGTGG AAGAAATGTG CGCGTCAGGC GGTTACTACG TGGCTGCCGC TGCTGACAGG
ATTTACGTCG ACAAGGCCAG CATCGTCGGT TCCATCGGCG TGCTGATGGA CGGCTTCGGC
TTTACTGGTC TGATGGACAA AGTGGGCGTG GAGCGCCGCC TGCTCACCGC CGGTTCGAAC
AAGGGAATGC TCGATCCGTT CTCACCCGTG TCGCCCCAGC AGAAACAGTA TGCGCAGGAG
ATGCTGGACC AGGTGCATCA GCAGTTCATC GACGTGGTCA AGCAGGGCCG CGGCAACCGT
CTGAAGGACG ATCCCACGCT GTTCACTGGT TTGTTCTGGA CGGGCGCCAA GGCGGTGGAT
CTGGGCCTGG CCGACGCGAT CGGCAGTTCG GACCTTGTCG CGCGCAGCGT CATCAAGGCG
CCGGACGTGG TGGACTACAC CGTCAAGGAA AACTTCGCCT CGCGCGTGGC ACGCAAGCTC
GGCACGGCGA TGGGCGCGGG CGCAGTCAAG GCGCTGGCCA CTACGGGCCA GCTCAAGCTG
CTGATGAAGG AGTAG
 
Protein sequence
MTDSIPPKGP DDAPNEGAGK PEALEVTQHA DHPLEAELRN PPASASAASA PAGGWEREVL 
EKVLMATVRE QRAARRWRIF FRFVALGLIG VLIYAFASLE GETVSTGRHT AIVTLEGEIA
ANTNASAENI NASLQAAFAD DNTVGVILKI NSPGGSPVQA GMINDEIRRL RAKYKKIPLY
VVVEEMCASG GYYVAAAADR IYVDKASIVG SIGVLMDGFG FTGLMDKVGV ERRLLTAGSN
KGMLDPFSPV SPQQKQYAQE MLDQVHQQFI DVVKQGRGNR LKDDPTLFTG LFWTGAKAVD
LGLADAIGSS DLVARSVIKA PDVVDYTVKE NFASRVARKL GTAMGAGAVK ALATTGQLKL
LMKE