| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0905 |
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| Symbol | |
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| ID | 6286240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | - |
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| Start bp | 958631 |
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| End bp | 961666 |
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| Gene Length | 3036 bp |
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| Protein Length | 1011 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642624469 |
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| Product | ribonuclease, Rne/Rng family |
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| Protein accession | YP_001898487 |
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| Protein GI | 187928000 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0755598 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0613595 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGCA TGTTGTTCAA TGCGACGCAG CAAGAAGAAT TGCGCGTCGC CATTGTCGAT
GGTCAGAAAC TGATCGACAT CGACATCGAA ACCGCCGGGC GCGAGCAGCG CAAAGGCAAT
ATCTACAAGG GTGTCATCAC CCGCATCGAA CCGTCGCTGG AAGCGTGCTT CGTCAACTAC
GGCGAAGAGC GGCACGGTTT TCTCCCCTTC AAGGAAGTCG CCCGCGCCTA TTTCAAGGAC
GGTGTGGACG TGCGCGGCGC GCGCATCCAG GATGCCCTGT CTGAAGGCCA GGAGCTGATC
GTCCAGGTTG AAAAGGAAGA ACGCGGCAAC AAGGGAGCAG CCCTGACCAC GTTCATCTCG
CTGGCTGGCC GCTACCTCGT GCTGATGCCG AACAACCCGC GCGGCGGCGG CGTGTCGCGC
CGCATCGAGG GCGAGGACCG CCAGGAACTG CGCGAGACGA TGGCGCAACT GGAAGTGCCG
GACGGCATGA GCATCATCGC CCGCACCGCC GGCATTGGCC GCTCGGCCGA AGAGCTGCAG
TGGGACTTGA ACTACCTGAT GCAGCTGTGG AAAGCCGTCG ATGGTGCCGC CGTCGACAAC
AAAGCCCCGC TGCTGATCTA TCTCGAATCC AGCCTGGTGA TCCGCGCCAT CCGCGATTAC
TTCCAGCCGG ATATCGGCGA AATCCTGATC GATACGGACG ACATCTACGA TCAGGCCCGC
GCCTTCATGA GCGTGGTGAT GCCCGACAAC ATGAATCGGG TGAAGAAGTA CCGCGACGAC
GTTCCCCTGT TCTCGCGCTT CCAGATCGAA CACCAGATTG AATCAGCGTA CTCGCGCATG
GTCATGCTGC CCTCGGGCGG CGCCATTGTG ATTGACCACA CCGAGGCGCT CGTCGCCATT
GACGTGAACT CAGCGCGCGC TACCAAGGGC GCCGATATCG AAGAAACCGC CGCGCGCACC
AACCTTGAGG CTGCCGACGA AATCGCTCGC CAGCTCCGCC TGCGTGACCT CGGCGGCCTG
ATCGTGATCG ACTTCATCGA CATGGAGTCG AGCAAGGCGC AGAAGGATGT CGAAACCCGC
CTGAAAGACG CGCTGCGTCA CGACCGCGCC CGGGTGCAAA TGGGCAAGAT CAGCCGCTTC
GGCCTGATGG AGCTGTCGCG CCAGCGCCTG CGTCCGTCGC TGTCGGAAGG CTCGCACGTC
ACTTGCCCAC GCTGTAACGG CACGGGGCAT ATCCGCGATA CCGAATCGTC CGCCCTGCAG
GTGCTGCGCA TCATCCAGGA AGAGGCGATG AAGGAAAACA CCGCCGCGAT CCACTGCCAG
GTGCCGGTGG AAGTGGCTGC GTTCCTTCTC AACGAGAAGC GCCCGGACAT CAACCTGATC
GAGACGCGCT TCAAGGTCAA CGTGCTGCTG ATTCCGAACA AGCATCTGGA GACGCCGCAC
TACAAGCTGG AACGCCTGCG CCACGACGAT CCGCGCCTGG ACGACGACAA GGCCAGCTAT
AAGATGGCCG AAGAGGCCGC CAAGGAGCTG GAAGCCGACA CCGCTTACAG CACCCGCAAG
GAAACTGCCA AGCCGCGCCA GGAAGCTGCC GTCAAGGGCA TCACGCCGGA CCAACCGGCA
CCCGTGTCGG TGCCGCGCGC TGAGCGTCCG GTTCGTACTG AAGCCGCTCC GGCACCGCAA
GCGCCGGCCC CGGCTCCGGT CCCTGCCCAA GGTGGTTTTG TCTCGTGGCT GAAATCGCTG
TTTGGCGCCA AACCGGCCGA GCCGGTGGTG GCTGCGCCGG TCGAAACGCC GAAGCAACGA
GCTGAAGAAG GCAACCGCCA AGGCCGCGGC AATCGCCAGG ACCGTGGTGG CCGAGGCCAG
CGTGGCGAAC GTGGCGAGCG CCAAGGTCAA GGCCAGAACG GCCGCGATGG CAGCCGCCAG
GGCCGTGAGC GCAACGAAGC CCGCGAAGGT CAGCAACAAG TCCAGCGCGA AGGTCAACGT
GACGGTCAGC GCGGCAACCG CGATCGCAAC CGCCAGCCGG CCCAGGTCGA AGGCGCTGTC
CGCGAGACGG CTGAAGCGCG CCAGCCGCAG CAAGGTCAGG AGGTTCGCAC CGAGGGCCAG
AACCAGGGCC AAGGCCGCCG GGAGCGCAAC CAGGAACGTC GCGAGCGCCA ACCGCGTGAA
GGCCGAGAAG CCCGCGAAGG TCGTGAACCG CGCGAGCCGC GTGAAAACCG TGAGCCGCGC
GAAAACCGTG GCGAGCGCGA CGCACAAGCC AAGGAAGCCG CTTCCCTGGC TGCCGAAGGC
CTGATCGACC AGACCGCCGC ATCGCAAGTG CCGCAACCGC TGCTCGACAC CGCTGCTCCG
GTAGAAGGCA TCGAGGGCGA AGGCGTGACG CCGGGCGCGG AAGTCAACGG TGAAGGCGAA
GAGCGCCGTC GTCGTGGGCG CCGTGGCCGC AACCGCTATC GCCGTGACCG CGAGGGCGCG
GAAGGCGTCC GTGCGGAAGG TGAAGGTGAA GGCGAAAACG AAGGCGCCGA AAGCGCAGAC
GAAGCCGTCG CCGACATGCA TGCCGAGCCG GTGCTGCCCG CAACCGTGGC GGAACCTGTG
CAGACGACGT CGTTTGCACC GGTTGAGAAC CCGGCTCCGG TGGTGCAGGA ACCGGTGCAT
GCTGCGGAAG CCGTGGCCCC TGTGTCGGCC CTGCCGCAAG TGCAACCGAC GGAGCCCGCC
CTTGCAGCCG CTATCGCAGC GCCCGCAGCG GAAGTCGAAG CGGAAGCGCC TCAAGAGGCC
ATCGTGACGG CATTTGCGGA AGTGCCGGCT CCGGTCAGCA CGATCGCCAA GGCTTCGCCG
CTGCCGATCG AGACGCTGCA GAGCGTGCTG GACAATGCCG GAATGACGTG GGTCCACACT
GACAGTCAGA AGCTGCGCGC CTCGCAGGAA GAGGCTGCAC GCACCGTTAC GGCACCGCGT
GTGCCGCGCG AGCGCAAACC GCTGCCGCCG GTCCAGCACG GCCCGATGGT TCTGGTCGAG
ACCCACCGTC CGGCGGGTGG CGCAGACCAG CAGTAA
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| Protein sequence | MKRMLFNATQ QEELRVAIVD GQKLIDIDIE TAGREQRKGN IYKGVITRIE PSLEACFVNY
GEERHGFLPF KEVARAYFKD GVDVRGARIQ DALSEGQELI VQVEKEERGN KGAALTTFIS
LAGRYLVLMP NNPRGGGVSR RIEGEDRQEL RETMAQLEVP DGMSIIARTA GIGRSAEELQ
WDLNYLMQLW KAVDGAAVDN KAPLLIYLES SLVIRAIRDY FQPDIGEILI DTDDIYDQAR
AFMSVVMPDN MNRVKKYRDD VPLFSRFQIE HQIESAYSRM VMLPSGGAIV IDHTEALVAI
DVNSARATKG ADIEETAART NLEAADEIAR QLRLRDLGGL IVIDFIDMES SKAQKDVETR
LKDALRHDRA RVQMGKISRF GLMELSRQRL RPSLSEGSHV TCPRCNGTGH IRDTESSALQ
VLRIIQEEAM KENTAAIHCQ VPVEVAAFLL NEKRPDINLI ETRFKVNVLL IPNKHLETPH
YKLERLRHDD PRLDDDKASY KMAEEAAKEL EADTAYSTRK ETAKPRQEAA VKGITPDQPA
PVSVPRAERP VRTEAAPAPQ APAPAPVPAQ GGFVSWLKSL FGAKPAEPVV AAPVETPKQR
AEEGNRQGRG NRQDRGGRGQ RGERGERQGQ GQNGRDGSRQ GRERNEAREG QQQVQREGQR
DGQRGNRDRN RQPAQVEGAV RETAEARQPQ QGQEVRTEGQ NQGQGRRERN QERRERQPRE
GREAREGREP REPRENREPR ENRGERDAQA KEAASLAAEG LIDQTAASQV PQPLLDTAAP
VEGIEGEGVT PGAEVNGEGE ERRRRGRRGR NRYRRDREGA EGVRAEGEGE GENEGAESAD
EAVADMHAEP VLPATVAEPV QTTSFAPVEN PAPVVQEPVH AAEAVAPVSA LPQVQPTEPA
LAAAIAAPAA EVEAEAPQEA IVTAFAEVPA PVSTIAKASP LPIETLQSVL DNAGMTWVHT
DSQKLRASQE EAARTVTAPR VPRERKPLPP VQHGPMVLVE THRPAGGADQ Q
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