Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0896 |
Symbol | |
ID | 6287448 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 948839 |
End bp | 950008 |
Gene Length | 1170 bp |
Protein Length | 389 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642624460 |
Product | nicotinate phosphoribosyltransferase |
Protein accession | YP_001898478 |
Protein GI | 187927991 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1488] Nicotinic acid phosphoribosyltransferase |
TIGRFAM ID | [TIGR01514] nicotinate phosphoribosyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.477693 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.0227421 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCATCC GCTCGTTGCT CGATACCGAT CTGTACAAAT TCACGATGAT GCAGGTGGTG CTGCATCACT TTCCTGGCGC GCACGTCGAA TACCGCTTTA AGTGCCGTAA CGCGGGCGTC GATCTGGTGC CGTTCATTGA AGAGATCCGC GCGGAAATCC GCCATCTCTG CACCCTGCGC TTTACCGATA CGGAACTTGA TTACCTGCGC GGCATGCGCT TCATCAAGAG CGATTTCGTC GATTTTCTCG GCCTGTTCCA TCTCAACGAG AAGTACATCG ACGTGCGCCC GGCGCCGAGC AACGATGGGC AGATCGAGAT CGTCATCGCG GGGCCGTGGC TGCACACGAT CATGTTCGAG GTGCCCGTTC TGGCCATCGT CAACGAGGTG TTCTTCAGCC GCACGCAGAC GCACCCGCAG TGGGAGGAGG GCAAGCGCCG CCTGACCGAC AAGCTGGCAT CGCTGAAGCG CCCCGGCCTG GAAGACTGCC GCATTGCCGA CTACGGCACC CGCCGCCGTT TTTCGCACAC TTGGCATGAG CATGTGCTGC TGGAGACGCA TGCGCAACTC GGCGCCCAGT ACGCGGGCAC GAGCAACGTC TACTTCGCCA TGAAGCACGG CATGACGCCG CTGGGCACCA TGGCGCATGA ATACCTTCAG GCCTGCCAAG CGCTGGGTCC GCGCCTGCGC GATTCCCAGA CCTTTGCGCT GGAAACCTGG GCCAAGGAAT ATCGCGGCGA CCTCGGCATC GCGCTGTCGG ATACCTACGG CTTTGACGCC TTCCTGCGCG ATTTCGACAT GTTCTTCTGC AAGCTCTTCG ACGGCGTTCG CCATGATTCT GGCGACCCGT TCGAGTGGGG CGAGCGCATG CTCAAGCATT ACGACGACAT GCGCGCCGAG CCGAAGTCCA AGGCGCTGAT CTTCTCCGAC AGCCTCGACA TGCCCAAGGT CATCGGCCTG TATGAGCGCT TTCATGGCCG CTGCAAGCTG GCGTTTGGCG TGGGGACCAA TCTGACAAAC GACCTGGGCT ACACGCCGCT GCAGATCGTC ATCAAGATAG TCCGCTGCAA TGGCCAGCCG GTGGCCAAAC TGTCGGACGC GCCGGAGAAG ACGATGTGCG ACGATCCAGC GTACCTCACG TACCTGAAGC AGGTATTTGG CGTGCAATAA
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Protein sequence | MIIRSLLDTD LYKFTMMQVV LHHFPGAHVE YRFKCRNAGV DLVPFIEEIR AEIRHLCTLR FTDTELDYLR GMRFIKSDFV DFLGLFHLNE KYIDVRPAPS NDGQIEIVIA GPWLHTIMFE VPVLAIVNEV FFSRTQTHPQ WEEGKRRLTD KLASLKRPGL EDCRIADYGT RRRFSHTWHE HVLLETHAQL GAQYAGTSNV YFAMKHGMTP LGTMAHEYLQ ACQALGPRLR DSQTFALETW AKEYRGDLGI ALSDTYGFDA FLRDFDMFFC KLFDGVRHDS GDPFEWGERM LKHYDDMRAE PKSKALIFSD SLDMPKVIGL YERFHGRCKL AFGVGTNLTN DLGYTPLQIV IKIVRCNGQP VAKLSDAPEK TMCDDPAYLT YLKQVFGVQ
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