Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0846 |
Symbol | |
ID | 6286904 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 898463 |
End bp | 899653 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 642624410 |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_001898428 |
Protein GI | 187927941 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.0129506 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.750819 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACCACA CCGCCTGTAC CTTCTCCAGC CGCGCTCAGA AACTGACCAG CTCGGCGATC CGGGAAATCC TCAAGATCAC CGAACGTCCT GAGGTCATTT CGTTTGCCGG TGGCCTGCCC GCCCCGGTCA CCTTCCCGGT CGAAGCGATT CAGGCGGCGT GCGCCCGCAT GTTTGCAGAC AACCCGCAGG CTTCGCTGCA GTACACCCCC ACCGAAGGCC TGTCGGTGCT GCGCGAGTGG ATTGCCCAGC GTCATGGCAC CACCGCCTCG CGCGTGCTGA TCACCACGGG TTCGCAGCAG GGGCTGGACC TGCTCGGCAA GATCTTCATC GACCCGCAAA GCAAGGTGCT GGTCGAAACC CCGACATACC TCGGCGCGCT GCAGGCGTTC TCGCTGTTCG AGCCGACCTA TACGTCCATC GCCACCGACG ACAAGGGCCT GCTGCCCGAC GCGCTCACGC CGGAACTGGC TGCCGGGGCG CGCTTCTTCT ACACGATCCC GAACTTCCAG AACCCGACCG GCCGCCGCCT GCCGCTGGAC CGCCGCCAGG CCCTGGTGGC CCGCGCGAAG GAACTCGGCG TGCTGCTCGT TGAAGACGAT CCGTACGGCG AACTGAGCTA CACCGGCGAC GCCCTGCCCT CGCTGCGCTC GCTCAATCCG GACGGCGTGG TCTACATGGG CTCGTTCTCG AAGATCCTGG CACCGGGCAT GCGCCTGGGC TACATCATCG CGCCCGAACA CATCCACTTC AAACTCGTGC AGGCCAAGCA GGCATCGGAT CTGCACACGC CGAGCTTCAC GCAGCGTGTG GCGTACGAGG TGCTGAAGAC CGGGCTGCTC GATACGCACA TCCCGAGCAT CCGAAACCTC TACGGCAAGC AATGCGAAGC GATGCTCGAC TCGCTCACGC GCCATATGCC GGCCGGCGTG CACTGGAACC GTCCGGAAGG CGGCATGTTC ATCTGGGTGG AAGTGCCGGA AGGCATCGAC ACGATGGCGC TGCTGGAGAA GGCCGTCGCG CGCAACGTGG CGTTCGTGCC GGGCGCGCCG TTCTATGCCA ATGCGCCGCG CCGCAACACA CTCCGCCTCG CGTTCGTGAC AGTGGCACCG GAGCGTATCG AGCAAGGCAT TGCCGTGCTG GGCGAGTTGA TGCGCGCGGA AATCGCGGCG CTCACGCCCA AGGCCGCCTA A
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Protein sequence | MDHTACTFSS RAQKLTSSAI REILKITERP EVISFAGGLP APVTFPVEAI QAACARMFAD NPQASLQYTP TEGLSVLREW IAQRHGTTAS RVLITTGSQQ GLDLLGKIFI DPQSKVLVET PTYLGALQAF SLFEPTYTSI ATDDKGLLPD ALTPELAAGA RFFYTIPNFQ NPTGRRLPLD RRQALVARAK ELGVLLVEDD PYGELSYTGD ALPSLRSLNP DGVVYMGSFS KILAPGMRLG YIIAPEHIHF KLVQAKQASD LHTPSFTQRV AYEVLKTGLL DTHIPSIRNL YGKQCEAMLD SLTRHMPAGV HWNRPEGGMF IWVEVPEGID TMALLEKAVA RNVAFVPGAP FYANAPRRNT LRLAFVTVAP ERIEQGIAVL GELMRAEIAA LTPKAA
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