Gene Rpic_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic_0790 
SymbolmetN 
ID6288198 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12J 
KingdomBacteria 
Replicon accessionNC_010682 
Strand
Start bp836460 
End bp837509 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content64% 
IMG OID642624354 
ProductDL-methionine transporter ATP-binding subunit 
Protein accessionYP_001898373 
Protein GI187927886 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1135] ABC-type metal ion transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.264335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.409094 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCGAAC TCAAGGGGAT ATCGCAGCAC TTCCGGGGGG CGGGCGACCA TGACGTCCAC 
GCGCTGCGCG ACGTCGACCT GACCATCAAC CGCGGCGAGA TTTTCGGCAT CATCGGCCGC
AGCGGCGCGG GCAAAAGCAC GCTGGTCCGC GTCATCAATC TGCTGAACCG GCCCACCTCC
GGCACCGTCA CCGTGGCGGG GCAGGAGCTC ACCGCACTGA ATGCCGATGG GCTGCGCCAG
GCGCGCCGCA AGATCGGCAT GATCTTCCAG CACTTCAATT TGCTGTCGTC GCGCACCGTG
TACGACAACG TGGCGCTGCC GCTGGAGCTG GCCGGCACAT CGCGCGAACG CATCCGCGAG
ATCGTGTTGC CGCTGCTGGA ACTGGTGGGT CTGTCCGCAC ACAAGGATCG CTACCCCGCG
CAGATTTCCG GTGGCCAGAA GCAGCGCGTT GGCATTGCCC GCGCGCTGGC GAGCCAGCCC
GATGTGCTGC TCTCCGATGA GGCGACTTCC GCGCTGGATC CGGAGACGAC GCGCTCGATT
CTCGACCTGC TGCGCAAGAT CAACCGCGAA CTCGGTCTGA CCATCGTGCT GATCACGCAC
CAGATGGAAG TCATCAAGCA GGTGTGCGAT CGTGTGGCGG TGCTGGACGC CGGCCGTGTG
GTCGAACTCG GCCGCGTCAT CGATGTGTTC CTGCAACCCA AGCATGACGT GACGCGCGCG
CTCATCGGTG AGGTGATCTC GCAGGAGTTG CCGCCGTCCG TTCTGGCGCG CGTGGAAAGT
CGCCTCACCG CGCGTGAGCA GGGTGGCCGT GACCACCTGT TCCGTTTGGC CTTTACCGGT
GCAGGCGTGG ACCAGCCGGT GCTGGCGCAG GCGATCCGCA ACTATGGGCT CGACTTCAAC
ATTCTCCATG GCCACATCGA CGAGATTCAG GGCCAGGCGT TCGGCTCGCT GGCTATCCTG
GCGTCGGGCG AAACCGCTGA CATCAACAAC GCGATGAACT TCCTGCGCGA GCAAGGCGTG
GTGGTCGAGG AGATCAATCA TGTGGTCTGA
 
Protein sequence
MIELKGISQH FRGAGDHDVH ALRDVDLTIN RGEIFGIIGR SGAGKSTLVR VINLLNRPTS 
GTVTVAGQEL TALNADGLRQ ARRKIGMIFQ HFNLLSSRTV YDNVALPLEL AGTSRERIRE
IVLPLLELVG LSAHKDRYPA QISGGQKQRV GIARALASQP DVLLSDEATS ALDPETTRSI
LDLLRKINRE LGLTIVLITH QMEVIKQVCD RVAVLDAGRV VELGRVIDVF LQPKHDVTRA
LIGEVISQEL PPSVLARVES RLTAREQGGR DHLFRLAFTG AGVDQPVLAQ AIRNYGLDFN
ILHGHIDEIQ GQAFGSLAIL ASGETADINN AMNFLREQGV VVEEINHVV