Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0778 |
Symbol | cmk |
ID | 6286817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | + |
Start bp | 824382 |
End bp | 825077 |
Gene Length | 696 bp |
Protein Length | 231 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642624342 |
Product | cytidylate kinase |
Protein accession | YP_001898361 |
Protein GI | 187927874 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0283] Cytidylate kinase |
TIGRFAM ID | [TIGR00017] cytidylate kinase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.00825892 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
| |
Sequence |
Gene sequence | ATGTCCGACA CCGCTGCTTC CATGCCGTAC CCGGTCATCA CCATCGACGG TCCGACCGCA TCTGGCAAGG GCACGGTCGC TCACCAGATC GCTGATCTGC TCGGTTTTCA CTTGCTTGAT AGCGGGTCGC TGTACCGGTT GGTGGCGCTT GCCAGCATGC GCGAGAACAT CGACGACCAC GACGTTGAAA GTCTCGTGCG TATCGCCCGC GAACTGGATG TGCGCTTTAA GGCGGATCGC ATCTGGCTCA AGGGCGAAGA TGTGAGCTTG GCCCTGCGCC ATGAGTCCGT TGGCAATCAA GCTTCGGCCA TCGCCGTGCA TGGCGCGGTG CGGGAGGCGT TGCATGCACG CCAGCGCGCG TTCCTGGAGG CGCCCGGCCT CGTGGCCGAT GGCCGCGACA TGGGCACGGT GGTTTTCCCC GAAGCAGTGC TCAAGGTGTT TCTGACGGCA AGCGTGCAGG CACGCGCCGA GCGGCGCTAT AAACAATTGA TTGCAAAGGG TTTTTCTGCT ACAGTGGAAA GTCTTTCGCA GGACTTGGAG GCGCGTGATT TGCGGGATCG CACCCGCAGT GTCGCGCCGT TGCGTCCGGC GCAAGATGCG CGACAACTGG ATTCGTCCGA CATGACTGTC GATGAAGTCG TCGCGCAAGT ACTGGACTGG TACCGTCAGG TGCAGGGCGC CAACAAGGCA AACTGA
|
Protein sequence | MSDTAASMPY PVITIDGPTA SGKGTVAHQI ADLLGFHLLD SGSLYRLVAL ASMRENIDDH DVESLVRIAR ELDVRFKADR IWLKGEDVSL ALRHESVGNQ ASAIAVHGAV REALHARQRA FLEAPGLVAD GRDMGTVVFP EAVLKVFLTA SVQARAERRY KQLIAKGFSA TVESLSQDLE ARDLRDRTRS VAPLRPAQDA RQLDSSDMTV DEVVAQVLDW YRQVQGANKA N
|
| |