Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic_0750 |
Symbol | |
ID | 6289805 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12J |
Kingdom | Bacteria |
Replicon accession | NC_010682 |
Strand | - |
Start bp | 790346 |
End bp | 791254 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642624314 |
Product | transcriptional regulator, LysR family |
Protein accession | YP_001898333 |
Protein GI | 187927846 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 0.467939 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTGT CCTCGCTAGA GATCTTCCGG ACGGTCGTGC GGGAAGGCGG CGTCACGCGG GCGGCCCAGC AGTTGAATCG CGTGCAGTCG AATGTGACGA CACGCATCCG CCAGCTCGAA GCGTCACTCG GCGTGCAGCT GTTCGTGCGC GAAAGCAAGC GCATGGTGCT GACGCCCGCC GGACAGACCC TGCTGACCTA CGCCGACGAC ATCCTCCGTC TGGCCGCCGA GGCCCGCCAG GCCGTGCAGC CGAGCGAGCC GCACGGGCGC CTGCGCATCG CCTCGATGGA AAGCACGGCG GCCAGCCGCC TTCCTGCCCT GCTGGCCACG CTGCATCAAC GCTGGCCGCG CGTACAGCTC GAACTGGTGA CGATGACCAC GCGCCACTCT CTTCAGGCGC TATCGAACTT TGAAGTCGAT TGCGCGTTCG TTGCCGAAAC GGCGTGCCTG AACAACACGC GCGCCGCCAT GACCACGCTG CCGGCATTTG CCGAAGAGCT GGTGCTGATT GCCCACCGCG CCCATCCACC GATCCGCCGC GCGGCGGACG TGCAGACTGC CGGCATGCTC GCGTTCGAAC CTGGCTGCGC CTATCGGCAA TTGATCGAAG ACTGGTTCGC CGCAGACGGC GTGGTGCCGT CCCGCGTGCT GGAGCTTGGC TCGTACCACG CCATCATCGC GTGCGCGGCC GCCGGCATTG GTGTGGCGCT GGTGCCTCGC TCGGTGCTCG AGCTATATAC GAATGCGCCA GAAATCAGCA TCCACACGCT AGGCAAGCCG GGCCGTGTCG ACACGCTGCT TGCCTGGCAC CGCGACATGG CCGGACCCGC CCTGCAGGCG CTCGTGCAGG TGCTGAGCGA GCCCCAAGCA GCGGCAAGCA AAACCGCGCG GGAAGCCATT GCCGCCTAA
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Protein sequence | MDLSSLEIFR TVVREGGVTR AAQQLNRVQS NVTTRIRQLE ASLGVQLFVR ESKRMVLTPA GQTLLTYADD ILRLAAEARQ AVQPSEPHGR LRIASMESTA ASRLPALLAT LHQRWPRVQL ELVTMTTRHS LQALSNFEVD CAFVAETACL NNTRAAMTTL PAFAEELVLI AHRAHPPIRR AADVQTAGML AFEPGCAYRQ LIEDWFAADG VVPSRVLELG SYHAIIACAA AGIGVALVPR SVLELYTNAP EISIHTLGKP GRVDTLLAWH RDMAGPALQA LVQVLSEPQA AASKTAREAI AA
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