| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0747 |
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| Symbol | |
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| ID | 6289802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 785992 |
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| End bp | 788100 |
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| Gene Length | 2109 bp |
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| Protein Length | 702 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624311 |
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| Product | TonB-dependent siderophore receptor |
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| Protein accession | YP_001898330 |
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| Protein GI | 187927843 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4774] Outer membrane receptor for monomeric catechols |
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| TIGRFAM ID | [TIGR01783] TonB-dependent siderophore receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 0.429786 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGTC ATCTCGCGGC TCGCGCCTTC TCGTGCGCGC TGGCCGCCAT TCCTCTTGCC
GTTTCCACAT TGGCGCATGC CGAAGCCGGC CAGCCGGCCA CAGGTGGTGC CACGGTCGAC
CTGAACGAGA CGACCGTCAC GGCAGGCAGC CAGCGGGGCT TTGCAGCCAG CACGGCGCAG
GTCGGAGCGT TCCGCGGCAT GGTGTTGCGC GACATTCCTG CCACCGTGAA CGTGGTCACG
CGCGAGGCGC TTGATGCGCA GCAGGACACG TCGCTGTACG ACGCGCTGCG CAATACGGCG
GGCGTGACGC GCCAGCAGCT TTCAGGCGAA ACGTTCGACA ACCTCGCCAT CCGCGGCGTG
ACGCTGGAGA ACCGCACCAA TTTCCGCTTC AACGGCTCGA TGCCGATGGC TGCACTCACG
GCGATCCCGC TGGAAGACAA GGAACGCGTG GAGGTGCTGA AAGGCGTGTC AGCGCTGTAT
TACGGCTACA CGACGCCGGG CGGCGTGGTG AATTTCGTGA CCAAGCGGGC GGGCAATACG
CCGGTGACCA CGCTCGGCAT GCAGTTCGAC AGCAACGGCA CCGCTGTGGG CACGCTCGAC
GTCGGGCGCC GCTTCGGTGA AGACAATCAG TACGGCATTC GCTTCAACGC CGCGGGTGGC
TCGTTGCAGT CGCCTACCAG CGGCATTGAC GGCACGCGCC AGCTCGCCGC CGTGGCCTTC
GACTGGAAGG TCAACAGCCG CCTGAGCCTG AAAGCCGACG TGGAATATTC GCGCAAGGTC
ATCACCGAAC AGTCGGTGGT GACGCTGCCC GCCGCCAAAA ACGGGATCAT TACCTTGCCG
GCCATGCCCG ACCCGAGCAA ACGCATTTCG CCGGGCTGGG CCGACTTTGA TGGCAACAAC
ACCAACGCGC TGCTGCGTGC CGATTACGCG CTCGCCGATG CGTGGCTGCT GACGGTGGAA
GGCGGCATGT CGGAGACGGC ACGCACGCGG GCGTTCTCCG AATTCAAGCT GACCAACGCG
CTGACGGGCG CCGGCACGCT GTCCGGCCAG CGCCAGAACG GTCGCTGGAA TACCAGCCAC
CTGCGGGCCG ACGTTTCCGG TACCGAGAAG ACGGGTTGGA TCACGCATGA CCTGACCTTC
GGCGTTGCGC GTTCCGACAT GCGCCAGGCG GCGGTGTACT CCGACCGCTT TTCCGGCACG
CAGAATCTGT ACAACCCGGT CGACCTTGGC TGGCTGCCGA CCACCGGCAC CGGCTTTACC
GCCGAGCAGC GCGCGGTTGA TACGGGCGTC TACGCGCTGG ATCGCATGAC GCTGTCGGAG
CACTGGCAAG TCATCTTGGG CCTGCGCTAC ACGCGCTATA CCAGCGAGCA GGCGCCCAAC
CGCTACGAGG CCAGCAAGAC CACGCCGCTG GGGGCCGTCA TCTACAAGTT CACGCCGGCG
CTGTCGGCGT ATGCGTCGTA CGCGCAGGGC TTGGAAGCCG GCGCGCGGCC TCCGAACACG
GCCGCCAACG CCAACGTGGC CATGCCGCCT GCGCTGTCCG AGCAGAAGGA AGTGGGCGTG
CGCTACGAAA CGCCGGCCGG CACGCAACTC GCCGCTGCCG TGTACGACAT CGACCGCGCT
GCGAGTTACA CCAACGACGC GAACATCTTC GTGCAGGACG GCCGCGAGCG GATTCGGGGT
ATCGAGCTGA CCGCGCAGGG CCGCGTCACC CAGGATTTGT CGCTGCTGGC CTCGGCCGGC
TGGACGGACG CGAAGTTCCG CGGCGTCGGC AACGGCCTCG ACGGAAAAAC GCCGGAAAAC
ACGCCGCGCA GCACTGCCAG CGTCTTTGCC GAATACACGT TGCCGATGCT GCGTGCTGTC
TCGTTCAACG CGGGCGCCTA CTACCTTGGC CCACGACCTG TGAACGACGC CAACCAGGCA
GAGCTTGGCG GCACGACGCT TTTCAGTGCA GGCGTGCGCT ATGTGACGCG GATTTCGGGC
AAGCGCGCGA CGCTGCAATT CAATGTCGAC AACCTGACCG ACAAGCGCTA CTGGGCGGGC
GCCGGCAACA ACCGTCTGTC GATGGGGGCG CCGCGGCTGT TCAAGCTCGG CATGAAGATC
GATCTGTGA
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| Protein sequence | MNRHLAARAF SCALAAIPLA VSTLAHAEAG QPATGGATVD LNETTVTAGS QRGFAASTAQ
VGAFRGMVLR DIPATVNVVT REALDAQQDT SLYDALRNTA GVTRQQLSGE TFDNLAIRGV
TLENRTNFRF NGSMPMAALT AIPLEDKERV EVLKGVSALY YGYTTPGGVV NFVTKRAGNT
PVTTLGMQFD SNGTAVGTLD VGRRFGEDNQ YGIRFNAAGG SLQSPTSGID GTRQLAAVAF
DWKVNSRLSL KADVEYSRKV ITEQSVVTLP AAKNGIITLP AMPDPSKRIS PGWADFDGNN
TNALLRADYA LADAWLLTVE GGMSETARTR AFSEFKLTNA LTGAGTLSGQ RQNGRWNTSH
LRADVSGTEK TGWITHDLTF GVARSDMRQA AVYSDRFSGT QNLYNPVDLG WLPTTGTGFT
AEQRAVDTGV YALDRMTLSE HWQVILGLRY TRYTSEQAPN RYEASKTTPL GAVIYKFTPA
LSAYASYAQG LEAGARPPNT AANANVAMPP ALSEQKEVGV RYETPAGTQL AAAVYDIDRA
ASYTNDANIF VQDGRERIRG IELTAQGRVT QDLSLLASAG WTDAKFRGVG NGLDGKTPEN
TPRSTASVFA EYTLPMLRAV SFNAGAYYLG PRPVNDANQA ELGGTTLFSA GVRYVTRISG
KRATLQFNVD NLTDKRYWAG AGNNRLSMGA PRLFKLGMKI DL
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