| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic_0744 |
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| Symbol | alaS |
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| ID | 6288636 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12J |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010682 |
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| Strand | + |
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| Start bp | 780478 |
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| End bp | 783144 |
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| Gene Length | 2667 bp |
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| Protein Length | 888 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642624308 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001898327 |
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| Protein GI | 187927840 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.453512 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.711122 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGACTC CGGCACCCCG CGACATGAAA GCCTCCGATA TCCGCCAAAA ATTCCTGACG
TTCTTTGAGG GCAAGGGCCA CACCGTGGTG CGCTCTTCGC CGCTGGTGCC GGGCAACGAC
CCGACGCTGC TGTTCACCAA CTCCGGCATG GTGCAGTTCA AGGACGTCTT CCTCGGTACC
GACAAGCGCC CGTACGTGCG TGCGGCCTCC GTGCAGCGCT GCCTGCGCGC CGGCGGCAAG
CACAACGACC TGGAAAACGT CGGCTATACG GCGCGCCACC ACACGTTCTT CGAAATGCTT
GGCAACTGGT CGTTCGGCGA CTACTTCAAG CGCGACGCAC TCGTGTGGGC GTGGGAGCTG
CTGACGCAGG AATACAAGCT GCCGGCCGAG AAGCTGTGGG CCACGGTCTA CCAGACCGAC
GACGAGGCTT ACGACATCTG GACCAAGGTC ATCGGCTTGC CGCCCGAGCG CGTCGTGCGC
ATTGGCGACA ACAAGGGCGC GCCATACGCC TCCGACAACT TCTGGCAGAT GGCCGAAACC
GGCCCGTGCG GCCCGTGCTC GGAAATCTTC TACGACCATG GCCCCGACGT CTGGGGCGGC
CCCCCGGGAA GCCCGGAAGC CGACGGCGAC CGCTACATCG AAATCTGGAA CAACGTGTTC
ATGCAGTTCG ATCGCCAGCT CGATCCGGCG ACCGGCGAAT ACACGCTGAC CCCGCTGCCC
GCACCGTGCG TCGACACCGG CATGGGCATG GAACGCCTGG CTGCCATCCT GCAGCACGTG
CACAGCAACT ACGAGATCGA CCTGTTCCAG GCGCTCATCG CTGCCGCCGC GCGCGAGACG
AACACCAAGG ATCTGGCCAA CAACTCGCTG CGCGTGATTG CCGACCACAT CCGCGCATGC
TCGTTCCTGA TCGTCGACGG CGTGATCCCG GGCAATGAGG GCCGTGGCTA TGTGCTGCGC
CGGATCATCC GCCGCGCCAT CCGCCACGGT TACAAGCTCG GCTGCCGCGC AGCGTTCTTC
CACAAGCTCG TGGACGACCT CGTCGCGCAG ATGGGCGAGG CCTATCCGGA GTTGCGCGAG
GCGCGCGACC GTGTGGTCGA AGTGCTGCGT ACGGAAGAGG CGCGCTTCTT CGAGACCATC
GAGCACGGCA TGTCGATCCT CGACGCCGCG CTGGGCGAGC TGAAGACCTC GGGTGCCAAG
ATGCTCGACG GCGAACTGGC CTTCAAGCTG CACGACACCT ACGGTTTCCC GCTGGACCTG
ACGCAAGACG TCTGCCGCGA GAACGACGTG ATCGTCGACG AAGCGGCCTT TGACGCCGCC
ATGAACCGCC AGCGCGAGCA GGCACGCGCG GCCGGCAAGT TCAAGATGGC CGCCGGCACG
CTCGACTACA CCGGGGACAA GACAACGTTC CACGGCTACG AGCAGCTCGT GCGCGAAACC
GCGCGGGTGA CGGCGCTGTT TGTGGATGGC GCATCGGTGC AGGAAATGCA CCCGGGCCAG
ACCGGCGTGG TGGTGCTGGA CCACACCCCG TTCTATGCGG AATCGGGCGG CCAGGTTGGC
GACCAGGGCA CGCTCAAGGC TGCGACCGTC TGGTTTGATG TGGTCGACAC GCTCAAGGTG
CAGCCGGACG TGTTCGGCCA CCACGGCGAG CTGCGCACCG GCGTGCTGAA GGTTGGCGAT
GCCGTGGCGG CGGAGGTGGA CGCAGTGCGC CGCGCGCGCA CCATGCGCAA CCACTCGGCC
ACCCACCTGA TGCACAAGGC CCTGCGCGAA GTGCTGGGCA GCCACGTGCA GCAGAAGGGC
TCGCTGGTGG ATGCAGAAAA AACCCGCTTC GACTTCTCGC ACAACGCACC GATGACGCCG
CTGCAGATTC GCGAAGTGGA AGCGCGTGTC AACGCAGAAA TTTTTGCCAA CGCCGCGACG
AACGCCCAGC TCATGGGCTT TGACGACGCA GTCAAGAATG GCGCAATGGC CCTCTTCGGC
GAGAAGTACG GCGACGAAGT GCGCGTGCTG TCGATCGGTT CGTCGAAGGA ACTGTGTGGC
GGCACGCACG TGGCGCGCAC GGGCGACATC GGCCTGTTCA AGATCGTGAG CGAGTCGGGC
GTGGCGGCGG GGATTCGCCG TGTGGAAGCC ATCACTGGCG ACAACGTGCT GCATTACCTG
CAGACGCTCG ATACACGCAT CAACGAAGCG GCTGCCGCGC TGCGTGCGCA GCCGTCGGAA
CTGACGTCGC GCATCGTGCA GGTGCAGGAC CAGGTCAAGA CGCTCGAGAA GGAACTGGAG
CGCCTGAAGT CGAAGCTGGC CGCCAGCCAG GGCGACGAAC TTGTGAGCCA GGCCGTGGAC
GTTGCCGGCA TCAAGGTGCT GGCTGCCAAG CTGGACGGCG CCGATGCCAA GACGCTGCGC
GAGACCATGG ACAAGCTCAA GGACAAACTG CAGACCGCAG CCATCGTGCT GGGCAGCGTG
AGCGACGGCA AGGTTGCGCT GATTGCGGGC GTGACGGCTG ACGCCACGGC CAAGGTCAAG
GCGGGCGAGC TGGTCAACTT TGTCGCCCAG CAAGTCGGCG GCAAGGGCGG CGGCCGCCCG
GACATGGCCC AGGCCGGCGG CACGGAGCCG GACAACCTGC CGCAGGCGCT GGCCGGCGTG
GCAGCGTGGG TGCAGCAGAA GGTTTGA
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| Protein sequence | MLTPAPRDMK ASDIRQKFLT FFEGKGHTVV RSSPLVPGND PTLLFTNSGM VQFKDVFLGT
DKRPYVRAAS VQRCLRAGGK HNDLENVGYT ARHHTFFEML GNWSFGDYFK RDALVWAWEL
LTQEYKLPAE KLWATVYQTD DEAYDIWTKV IGLPPERVVR IGDNKGAPYA SDNFWQMAET
GPCGPCSEIF YDHGPDVWGG PPGSPEADGD RYIEIWNNVF MQFDRQLDPA TGEYTLTPLP
APCVDTGMGM ERLAAILQHV HSNYEIDLFQ ALIAAAARET NTKDLANNSL RVIADHIRAC
SFLIVDGVIP GNEGRGYVLR RIIRRAIRHG YKLGCRAAFF HKLVDDLVAQ MGEAYPELRE
ARDRVVEVLR TEEARFFETI EHGMSILDAA LGELKTSGAK MLDGELAFKL HDTYGFPLDL
TQDVCRENDV IVDEAAFDAA MNRQREQARA AGKFKMAAGT LDYTGDKTTF HGYEQLVRET
ARVTALFVDG ASVQEMHPGQ TGVVVLDHTP FYAESGGQVG DQGTLKAATV WFDVVDTLKV
QPDVFGHHGE LRTGVLKVGD AVAAEVDAVR RARTMRNHSA THLMHKALRE VLGSHVQQKG
SLVDAEKTRF DFSHNAPMTP LQIREVEARV NAEIFANAAT NAQLMGFDDA VKNGAMALFG
EKYGDEVRVL SIGSSKELCG GTHVARTGDI GLFKIVSESG VAAGIRRVEA ITGDNVLHYL
QTLDTRINEA AAALRAQPSE LTSRIVQVQD QVKTLEKELE RLKSKLAASQ GDELVSQAVD
VAGIKVLAAK LDGADAKTLR ETMDKLKDKL QTAAIVLGSV SDGKVALIAG VTADATAKVK
AGELVNFVAQ QVGGKGGGRP DMAQAGGTEP DNLPQALAGV AAWVQQKV
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